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Sequencing-based assays (Page 96)

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Explore curated data sets and assays

Sequencing-based assays (Page 96)

GSE127734: TNIK signaling imprints CD8+ T memory formation early after priming

GSE132306 (mouse): N6-methyladenosine (m6A) profiling of EndoC-bH1 cell line and RNA seq of Mettl14 knockout mice beta cell

GSE145888: JunB-dependent expression in colonic and Peyer's patch regulatory T cells

GSE136996: Dermal sheath contraction powers stem cell niche relocation during hair cycle regression

GSE127795: ADAR1 mediated regulation of neural crest-derived melanocytes and Schwann cell development.

GSE154775: Single cell transcriptome profiling for hidradenitis suppurativa

GSE140767: ATRA enhances differentiation from human induced pluripotent stem cells into esophageal epithelium

GSE143406: Next Generation Sequencing Facilitates Quantitative Analysis of transcriptomes in ARP-1 cells treated with DMSO and carfilzomib (Cfz)

GSE155435: Exposure to tert-butylphenyl diphenyl phosphate, an organophosphate ester flame retardant and plasticizer, alters hedgehog signaling in ex vivo murine limb bud cultures

GSE152113: Mediator Med23 regulates adult hippocampal neurogenesis

GSE136623: Metabolic regulation of BCAAs and glycogen via IRF4 in skeletal muscle

GSE138538: Delineating the Role of MITF Isoforms in Pigmentation and Tissue Homeostasis

GSE127768: Inhibition of glycolysis in pathogenic TH17 cells through targeting a miR-21-Peli1-c-Rel pathway prevents autoimmunity

GSE142695: Analysis of gene expression in lung adenocarcinoma cells following over-expression of miR-30a-5p or miR-30a-3p

GSE143404: The Xenobiotic Transporter Mdr1 Enforces T Cell Homeostasis in the Presence of Intestinal Bile Acids [Rh123hi-lo RNA-Seq]

GSE152058 (human): Cell Type-Specific Transcriptomics Reveals that Mutant Huntingtin Leads to Mitochondrial RNA Release and Neuronal Innate Immune Activation

GSE127809: Precise small molecule cleavage of a r(CUG) repeat expansion in a myotonic dystrophy mouse model

GSE137225: Transcriptome analysis upon REXO2 silencing

GSE137408: Splicing and gene expression changes in human MDAM-MB231 breast cancer cells with TRA2B knockdown

GSE138085: Gene expression changes in cervical motor neuron transcriptomes after loss of Hox5 transcription factors

GSE136640: CXCR5+PD-1+CD8+ T cells are a distinct sublineage of CD8+ Tfh cells and Stat5 suppresses the expression of the Tfh-specific genes in CXCR5+PD-1+CD8+ T cells [RNA-Seq]

GSE152146: TNF induced inflammatory transcription dynamics and epigenetic changes

GSE130406: Rescue of T cell exhaustion by ingenol mebutate

GSE127955: Single-cell RNA-seq of human cardiovascular progenitor cells generated with a chemically defined, xeno-free laminin based differentiation protocol

GSE138165: Syndromic immune disorder caused by a viable hypomorphic allele of spliceosome component Snrnp40

GSE127790: Nuclear exosome targeting complex core factor Zcchc8 regulates the degradation of LINE1 RNA in early embryos and embryonic stem cells

GSE130254: Regional Analysis of The Brain Transcriptome In Mice Bred For High And Low Methamphetamine Consumption

GSE137460: Identification of a unique subtype of lung squamous cell carcinoma defined by SOX2 and a neural differentiation factor BRN2 [RNA-seq]

GSE137391: Transcriptomics profiling of some commonly used cell lines at the base-line culture condition

GSE137967: Human lung and lung draining lymph node T cell sequencing

GSE145919: Gene expression profiling of murine tumors derived from Renca control knockout vs Pbrm1 knockout tumor clones

GSE140771: Differential gene expression profiles in imatinib-resistant cell lines

GSE131847: Molecular determinants and heterogeneity of circulating and tissue-resident memory CD8+ T lymphocytes revealed by single-cell RNA sequencing

GSE137228: Blockade of lL17 signaling reverses alcohol-induced liver injury, and excessive alcohol drinking in mice.

GSE137627: Analysis of transposable element expression in a time course RNA-seq of mouse ESC differentiation to EpiLCs

GSE138164: Transcriptome of RABV infected mouse brain

GSE141834: Transcriptional Heterogeneity within the Glucocorticoid Response

GSE138024: RGS4 Maintains Chronic Pain Symptoms in Rodent Models

GSE138170: Profiling of the reprogramome and quantification of fibroblast reprogramming to pluripotency

GSE137492: Dissecting the dynamics of signaling events in the BMP,WNT and NODAL cascade during self-organized fate patterning in human gastruloids

GSE133582: The RNA N6-methyladenosine regulates chromatin remodeling and transcription [seq_nascentRNA]

GSE146000: Regional gene expression profiling upon loss of NFIA in adult astrocytes

GSE129490: Avidity Selection of Natural Killer Response to MCMV

GSE139348: RNA-seq to measure gene expression changes caused by Dicer1 knockout in mouse embryonic stem cells (mESCs)

GSE137370: Transcriptome profiling of influenza-specific memory CD8 T cells following transfer into the airways or in vitro culture

GSE137213: Enriched environmental conditions modify the gut microbiome composition and fecal markers of inflammation in Parkinsons disease

GSE143453: Single-nucleus RNA-seq identifies divergent populations of FSHD2 myotube nuclei [Time course]

GSE127804: Non-core subunits of the PRC2 complex are collectively required for its target site specificity

GSE127854: Repurposing an anti-cancer drug for the treatment of hypertrophic heart disease

GSE132583: Circulating tumor cells exit circulation while maintaining multicellularity augmenting metastatic potential

GSE138052: mRNA sequencing analysis of a novel model of 'NAFLD in a Dish'

GSE139427: Ibrutinib-mediated atrial fibrillation

GSE127902: Next Generation Sequencing Facilitates Quantitative Analysis of Macrophage (RAW264.7) with and without arctigenin treatment

GSE139406: LOC90024-encoded small protein SRSP regulates mRNA splicing

GSE137449: Role of Cyp2b in diet-induced nonalcoholic steatohepatitis (NASH)

GSE137561: Desmoplastic small round cell tumor is dependent on EWS-WT1

GSE127932: Tox4 Modulates Cell Fate Reprogramming

GSE137606: Identification of novel genes involved in postnatal longitudinal muscle growth

GSE130355: Spontaneous direct fate conversion of neuroblasts into oligodendrocytes upon demyelination in the adult mouse brain

GSE137253: MYC predetermines the sensitivity of gastrointestinal cancer to antifolate drugs through regulating TYMS transcription

GSE139536: Investigating the role of Foxp1 in murine A20 lymphoma cells

GSE137702: Gene expression (RNA-Seq) in pediatric high-grade glioma cell lines treated with selinexor and vehicle

GSE137630: RNA-seq of mouse sperm samples from different treatment groups

GSE137792: Sex chromosomes affect gene expression of healthy CD4+ T cells in SJL.

GSE127833: Derivation of functional oocytes from granulosa cells

GSE142706: Chronic IL-1 exposure drives LNCaP cells to evolve androgen and AR independence

GSE131842: Transcriptomic and epigenomics atlas of myotubes reveals insight into the circadian control of metabolism and development [RNA-Seq]

GSE131845: TIP5 primes prostate luminal cells for the oncogenic transformation mediated by PTEN-loss

GSE137775: CREB5 promotes resistance to androgen-receptor antagonists and androgen deprivation in prostate cancer

GSE130330: Pygopus2-Histone interaction is important for de-differentiation and breast cancer progression [RNA-Seq]

GSE137387: Gene expression profiles of mouse colitis epithelial tissues induced by DSS or DSS/PhIP

GSE137491: A functional link between nuclear RNA decay and transcritional control mediated by the Polycomb Repressive Complex 2

GSE137636: Transcriptomic profiling of mouse lung tumor cells in response to CDK7 inhibitor treatment

GSE140559: The RNA N6-methyladenosine regulates chromatin remodeling and transcription [HEC-1-A_seq_RNA_nascent]

GSE140683: WT and Aire-KO mouse MEChi RNAseq profiling

GSE137649: Sequencing analysis of sorted bone marrow endothelial cells

GSE137576: Transciptome analysis of human aortic smooth muscle cells (HASMCs) with 2-hydroxypropyl--cyclodextrin (HPbCD) treatment

GSE138026: Cytosolic phospholipase A2 alpha regulates TLR signaling and migration in metastatic 4T1 cells