Analysis is no longer your rate-limiting factor
Pluto makes it possible for every biologist to test their hypotheses intuitively, with a wide-variety of industry-standard computational biology analyses on a flexible, no-code canvas. Stop waiting for someone else to run your analysis, start using Pluto to get hands-on with your data.
Talk to our science team
Easy-to-use analyses, endless biological applications
Pluto removes the barriers between the scientific questions you want to ask, and the analyses needed to answer them. Combine suggested analyses based on assay type and your experimental design, or start with a blank slate and let each new finding unfold in real time. Plus, explore different parameters without losing your place - Pluto tracks all changes and customizations automatically for end-to-end reproducibility.
Summary analysis
Quickly summarize and compare raw or noramlized data across groups, however you choose to define them, for concise overview of your experimental results, enabling easy interpretation and decision-making.
Differential analyses
Investigate genome-wide gene expression, binding, protein levels, and more using gold-standard computational biology algorithms. Flexibly compare conditions, treatments, and any other variables relevant to your study.
Pathway analyses
Explore the molecular pathways driving biological functions and diseases. Use powerful pathway analysis tools including GSEA, TFEA, ORA, and STRING to facilitate the discovery of critical interactions and regulatory networks.
Longitudinal analysis
The component of time is a critical one in biological systems. Track changes longitudinally to examine temporal and continuous data, study developmental stages, treatment responses, disease progression, and more.
Dimensionality reduction
Simplify complex data sets with our dimensionality reduction tools. Utilize PCA, UMAP, and t-SNE to uncover patterns and relationships in high-dimensional data, facilitating intuitive sample clustering.
Over-representation
Identify enriched pathways and biological processes with ORA. By comparing your data against known gene sets, discover the underlying mechanisms relevant to your research.
Imaging
Combine quantitative data with qualitative insights. Our imaging module enables you to annotate and quantify images directly within the platform, streamlining the integration of morphological data with molecular analyses.
Functional
Uncover the biological functions and pathways associated with your data. Our functional analysis tools, including GO and KEGG, provide a comprehensive view of the biological context underlying your results.
Marker Expression
Investigate the expression of specific marker genes across single-cell RNA-seq data using customizable ridge plots, violin plots, and UMAP projections.
Why choose a platform?
With the recent increased focus on digital transformation and reproducibility, more and more life sciences companies are choosing SaaS solutions over custom developed tools. Benefits of implementing a bioinformatics discovery platform include:
- Higher adoption across broader user base
- Faster time to insight, raw data to presentation-ready figures
- Long-term searchability for data, results, and IP / evidence
- Standardization for pipelines, analyses, and results
- Secure authentication and granular access controls
The ROI for collaboration
Scientific teams previously waiting weeks for data analysis and visualization have seen a substantial boost in productivity by using Pluto to streamline collaboration between biologists and bioinformaticians. How does this look in practice in Pluto?
- Biologists receiving data can immediately run QC & quantification
- Scientist performs own exploratory analysis on the Pluto canvas
- Starts a comment thread on their plot with the bioinformatics team
- Bioinformaticians use Pluto R package to perform custom meta-analysis
- Programmatically push results back to the Pluto canvas
- All collaborators can customize and export all plots for presentation
- Automatic audit log tracks each collaborator's actions
Comprehensive analysis suite
Pluto combines a wide array of bioinformatics analyses into a single intuitive, browser-based platform so that you don't have to visit tools in disparate locations.
Dynamic data visualization
Transform your data into compelling stories with Pluto.bio's dynamic data visualization capabilities. Interactive and embeddable plots not only illustrate your findings but also invite collaboration and deeper investigation. Whether you're summarizing experiments, exploring gene sets, or mapping protein interactions, our visualization tools help communicate complex data in a clear and impactful way.
Learn more about visualizationsEnd-to-end reproducibility, without sacrificing flexibility
Ensure the integrity of your research with Pluto's standardized pipelines and automatic tracking for all parameters throughout the analysis process. Replicate studies and verify results with confidence.