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Sequencing-based assays (Page 7)

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Explore curated data sets and assays

Sequencing-based assays (Page 7)

GSE146867: RNA editing enzyme APOBEC3A promotes pro-inflammatory (M1) macrophage polarization

GSE71800: Integrated analysis of MLL-AF9 AML patients and model leukemias highlights RET and other novel therapeutic targets (RNA-seq AML development)

GSE67374: Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type, 4L;C* and Isofagamine treated 4L;C* region specifics mouse brain Transcriptomes (RNA-Seq)

GSE71304: Regulatory T cells from colonic lamina propria [RNA-Seq]

GSE73317: Gene expression analysis of BRD4 knockdown in HT-29 and HCT116 cells

GSE94438: A blood RNA signature for tuberculosis disease risk in household contact study - GC6 cohort.

GSE100102: Innate immune sensing of cytosolic chromatin fragments through cGAS promotes senescence

GSE72603: mRNA-seq data from adipose tissues of the great roundleaf bat (Hipposideros armiger) and mouse

GSE71309: A mechanism for expansion of the regulatory T cell repertoire and its role in enforcing self-tolerance.

GSE74682: RNA-seq of Mesp1-induced cardiopharyngeal mesoderm derivatives from ES cells

GSE76523: Methylomes and Transcriptomes of Human Pluripotent-to-Cardiomyocyte Differentiation [RNA-seq]

GSE67863: A lineage of myelolymphoblastic innate cells unmasked by inactivation of mTOR complex 1

GSE123518: A novel target of EZH1/2 for treatment of mantle cell lymphoma

GSE88956: CD74 role in transcription regulation [RNA-seq]

GSE75327: Aberrant downstream mechanisms following loss of KMT2C and KMT2D in Pancreatic Ductal Adenocarcinoma

GSE75852: Cerebellar differentiation in Ataxia-Telangiectasia

GSE76149: Gene expression profiling of sensory epithelium of cochleas and vestibules of the inner ears of wild-type C57Bl/6J mice at post-natal day 0 (P0)

GSE67889: Sequential Notch activation regulates ventricular chamber development

GSE79095: Alternative splicing regulation by homologous Muscleblind proteins

GSE78128: RNA-sequencing of non-senescent and senescent mouse skin fibroblast

GSE75291: RNA-seq analysis upon ARID1B overexpression

GSE92282: Early life antibiotic treatment enhances the pathogenicity of CD4+ T cells curing intestinal inflammation

GSE88732: Systematic Identification and Characterization of Long Non-coding RNAs in Mouse Mature Sperm

GSE74230: Positively selected enhancer elements endow tumor cells with metastatic competence

GSE145265: Transcriptomic analysis of mouse brain microglia on aging-associated changes in response to cerebral ischemia

GSE72546: RNA sequencing of pancreatic islets and islet-derived macrophages and endothelial cells modulated by vascular endothelial growth factor-A signaling

GSE75219: Foxn1 choreographs both early and late events in thymic lympho-stromal cross-talk

GSE73721: RNA-Seq of human astrocytes

GSE102533: Genome wide transcriptome analysis of Jak2 KD persistent murine E-Crlf2/Jak2R683G B-ALL cells

GSE99112: A Upf3b-mutant mouse model with behavioral and neurogenesis defects

GSE79684: Loss of CREBBP results in gene expression repression in lymphoma cells

GSE107770: Alternative splicing of differentiated myeloid cell transcripts after infection by Anaplasma phagocytophilum impacts a selective group of cellular programs

GSE144274: RNA sequencing of healthy and diseased (idiopathic pulmonary hypertension) human pulmonary artery smooth muscle cells

GSE72627: Transcriptome profiles of moderate dysplasia in oral mucosa associated with malignant conversion

GSE72671: Gfi1 as a new predictive and therapeutical target of MDS/AML

GSE75854: H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation [Ring1a-1b_RNASeq]

GSE83755: Dnmt3a Regulates T-cell Development and Suppresses T-ALL Transformation (RNA-seq)

GSE75357: PS2APP whole tissue RNAseq

GSE79698: The effect of niclosamide on the growth and progression of endometriosis in an experimental mouse model

GSE73433: Redifferentiation of expanded human islet cells by inhibition of ARX

GSE84374: Id3 Orchestrates Germinal Center B Cell Development

GSE73853: Transcriptome analysis of diverse cell types infected with human cytomegalovirus [RNA-Seq]

GSE73457: Genome-wide analysis of gene expression in MLL translocation transformed mouse leukemia cell lines

GSE74018: Acute myeloid leukemia requires Hhex to enable PRC2-mediated epigenetic repression of Cdkn2a (RNA-Seq)

GSE133079: Systematic identification of cell-cell communication networks in the developing brain

GSE68921: Parkin-mediated mitophagy evokes perinatal cardiac mitochondria maturation

GSE69473: RAG Represents a Widespread Threat to the Lymphocyte Genome - (RNA-seq)

GSE74397 (mouse): N6-methyladenosine-Mediated Nuclear Export of Messenger RNA

GSE72369: Gene expression profiling of control cohesin knockdown LSK cells

GSE75853: H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation [RNA_Chondroblastoma_H3K36M_H3WT]

GSE73561: Gene expression analysis to identify Mef2c/d target genes in B-cell progenitors

GSE74283: Epithelial cell RNA-seq in aged skin

GSE99366: RNA-seq of subcellular fractions from nESC and EpiLC

GSE151116: Gene expression profiling of monocyte in response to Pf-iRBC stimulation from Pf-PCR negative Malian children and adults during dry season.

GSE72851: Intragenic DNA methylation prevents cryptic transcription initiations on gene bodies [ART-seq]

GSE73653: Polysome-seq of YBX heterozygous testes

GSE74235: Hydroxychloroquine inhibits responses to group A streptococcus in peripheral blood mononuclear cells

GSE73325: 4sUDRB-seq of human PA1 cells, undifferentiated H9 cells and H9 differentiated FB neurons

GSE76198: Cell type-specific alternative splicing of cytoskeletal domains governs cell fate in the developing cerebral cortex

GSE79108: Identification of preoptic sleep-promoting neurons based on projection target

GSE74170: Comparative Systems Pharmacology of HIF Stabilization in the Prevention of Retinopathy of Prematurity

GSE74429: Dclk1+ mouse pancreatic progenitor cells

GSE79739: Enhancer and transcriptomic changes in skeletal muscles in response to physical exercise

GSE85089: Integrator orchestrates RAS/ERK1/2 signaling transcriptional programs

GSE104658: Polycomb Repressive Complex 2 methylates Elongin A to regulate transcripiton [BrU-RNA-seq]

GSE76186: Sp7/Osterix is restricted to bone-forming vertebrates where it acts as a Dlx co-factor in osteoblast specification [RNA-Seq]

GSE74369: Tumor-derived circulating endothelial cell clusters diagnostic for early colorectal cancer

GSE79112: Gene expression profile using RNA-seq in WC00060 or SR-0788 cells transfected with siRNA for KPC1 or control

GSE75832: RNAseq from neonatal mouse hindlimb muscles

GSE70738: NCoR/SMRT co-repressors cooperate with c-MYC to create an epigenetic barrier to somatic cell reprogramming [RNA-seq]

GSE74377: Overexpression of PHF8 promotes an EMT-related gene signature in MCF10A cells

GSE74456: PAPTRAP

GSE75491: Determination of a comprehensive alternative splicing regulatory network and the combinatorial regulation by key factors during Epithelial-to-Mesenchymal Transition [RBM47 KD]

GSE74064: Therapeutic targeting of myeloid leukemias with spliceosomal mutations through modulation of splicing catalysis

GSE76877: RNA-Seq data for KRAS wild-type(WT) and two mutant forms G12V and Q61H over-expressed samples with green fluorescent protein control samples using human mammary epithelial cells

GSE144760: RNA-seq analysis of WT and OGT KO female islets

GSE75949: RNA-seq analysis of the human fetal kidney.

GSE76879: Expression profiling of p53-/- shPU.1 AML cells single cell clones