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Sequencing-based assays (Page 110)

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Explore curated data sets and assays

Sequencing-based assays (Page 110)

GSE139684: Transcriptional profiling of astrocytes in the prefrontal cortex, hippocampus, accumbens nucleus and caudate putamen of a Aldh1l1-TRAP (JD130) mouse line after chronic social defeat stress

GSE154234: Analysis of mRNA expression between irradiated and non-irradiated keloid-derived primary cells.

GSE150028: Reduced Brd1 expression leads to reversible depression-like behaviors and gene-expression changes in female mice [Striatum (CPu)]

GSE153447: Transciptomic analysis of human aortic smooth muscle cells (HASMCs) with BAF60a overexpression

GSE147666: Identification of genes showing an age related expression in iNKT1, 2, and 17 cells of BALB/c thymus

GSE154259: Tuft cells restrain pancreatic tumorigenesis through paracrine eicosanoid signaling [single-cell RNA-seq]

GSE137515: Genetic screen for neuropathic pain study in importin alpha3 knock out mice

GSE146978: Chronic expression of p16INK4a in the epidermis induces Wnt-mediated hyperplasia and promotes tumor initiation (2)

GSE150250: Gonadal white adipose tissue gene expression changes in response to adipose-specific Med19 knockout

GSE147544: RNA sequencing of motor neurons derived from induced pluripotent stem cells of ALS patients with the M337V mutation in TARDBP

GSE147596: Paired immunoglobulin-like receptors mediate innate memory to non-self MHC molecules

GSE154266: Bulk RNA-sequencing analysis of isogenic murine Kras/p53 (KP) Brg1 wildtype cells versus Brg1 knockout (KPB) cells

GSE147613: Paeonia lactiflora extract suppresses cisplatin-induced muscle wasting via donwnregulations of muscle-specific E3 ubiquitin ligases

GSE146487: Transcriptional profiling of endothelial cells lacking Tgfbr2

GSE137414: RNA sequencing of pancres tissue of WT and IL23 expression mice (KSR23)

GSE146959: RNA-sequencing of C3H/10T1/2 mesenchymal stem cells expressing H2B mutant histones

GSE149924: Skeletal muscle aging and pathways regulated by 15-PGDH inhibition

GSE150300: Changes of gene expression patterns of human cancer cell lines responding to Interferon-gamma

GSE147767: RNA sequencing of NT control cells, Traf3 KO, and Traf3/p100 double KO cells

GSE137337: Epigenetic regulator function through mouse gastrulation

GSE146478: The anti-fibrosis effect of iguratimod on skin tissues of systemic sclerosis patients

GSE150284: CoolMPS for robust sequencing of single-nuclear RNAs captured by droplet-based method

GSE151967: The Histone Methyltransferase Setd2 Modulates Oxidative Stress to Attenuates Colonic Inammation and Tumorigenesis [RNA-Seq]

GSE154182: Deletion of the gene encoding the N-methyl-D Aspartate Receptor GluN1 subunit in Schwann cells causes ultrastructural changes in Remak bundles and hypersensitivity in pain processing

GSE147493: Transcriptome analysis in a unique cohort of untreated primary tumors collected from diagnostic prostate needle biopsies (PNBX) of localized (M0) and metastatic (M1) cases

GSE147423: Transcriptomic analysis of day 1 (D1) differentiating WT and HDAC11-deficient mouse myoblasts

GSE153480: Single cell RNA-seq of neonatal heart regeneration

GSE150267: Sensory neurons expressing calcitonin gene-related peptide regulate adaptive thermogenesis and diet-induced obesity

GSE108115: UTX and 53BP1 co-regulate genetic programs for neural differentiation of human embryonic stem cells [RNA-seq]

GSE154254: Genetic deletion of microRNA biogenesis in muscle cells reveals a hierarchical non- clustered network that controls focal adhesion signaling during muscle regeneration

GSE137504: Genome-wide expression analysis of murine sciatic nerve of young and old mice

GSE147564: Single-nucleus RNA sequencing of intermediates during human primed and nave reprogramming.

GSE146784: T cells and Dendritic cells from MC38 tumors treated with anti-PD-1 or anti-PD-1 plus D18

GSE150069 (human): Development and Application of a Transcriptomic Signature of Bioactivation in an Advanced In Vitro Liver Model to Reduce Drug-induced Liver Injury Risk Early in the Pharmaceutical Pipeline

GSE146482: Next-generation sequencing reveals differential responses to acute versus long-term exposures to graphene oxide in human lung BEAS-2B cells

GSE154258: Tuft cells restrain pancreatic tumorigenesis through paracrine eicosanoid signaling [bulk RNA-seq]

GSE144999: Determining transcriptome changes in whole spinal cord of GarsC201R/+ adult mice [17-burgess-001]

GSE149965: RNA-seq of FACS-enriched mammary subpopulations (basal, luminal progenitor, mature luminal) from WT and ID4 knockout mice

GSE107806: RNA-sequencing of human peripheral blood mononuclear cells (PB MNCs) and induced neural progenitor cells derived from PB MNCs

GSE146524: Impact of liver-specific deletion of Dhcr24 gene on tissue gene expression

GSE154964: Transcriptome map of cancerous and para-cancerous tissues in patients with liver hepatocellular carcinoma

GSE150851: Transcriptomic changes of sigmoidal gut biopsies in psoriasis patients and healthy subjects

GSE146982: GPD1 enhances the anti-cancer effects of metformin by synergistically increasing total cellular glycerol-3-phosphate

GSE78957: Association with Aurora-A controls N-MYC-dependent promoter escape and pause release of RNA polymerase II during the cell cycle

GSE151638: Cardiomyocytes stimulate angiogenesis after ischemic injury in a ZEB2-dependent manner

GSE145656: Investigation of de novo mutations in a schizophrenia case-parent trio by induced pluripotent stem cell based in vitro disease-modelling: Convergence of schizophrenia and autism-related cellular phenotypes

GSE146101: STAT3 in the dorsal raphe gates behavioural reactivity and regulates gene networks associated with psychopathology

GSE147400: Knocking out non-muscle myosin II in retinal ganglion cells promotes long-distance optic nerve regeneration II

GSE154988: Properties of PD1+ B cells in Rheumatoid Arthritis (RA) Patients

GSE117699: p38 SAPK and SKIIP induced changes in alternative splicing patterns upon osmostress

GSE146962: O-linked -N-acetylglucosamine transferase plays an essential role in heart development through regulating angiopoietin-1

GSE150871: Scar-free healing and axon regeneration after spinal cord injury in neonatal mice is orchestrated by microglia

GSE137899: Gene expression profiling of tankyrase-inhibited mouse articular chondrocytes

GSE146812: Tet2-mediated clonal hematopoiesis in nonconditioned mice accelerates age-associated cardiac dysfunction

GSE149991: Exposure to mites sensitizes intestinal stem cell maintenance, splenic marginal zone B cell homeostasis, and heart development to Notch dosage and cooperativity [RNA-seq]

GSE154199: RNA sequencing of KAT5 mutant patient-derived fibroblasts

GSE147026: Transcriptome analyses in aortic dissection and normal human aorta

GSE140890: Parallel scRNA-seq and genetic recording reveals lineage decisions in early mouse embryogenesis

GSE135866: Cytotoxic therapy-induced effects on both hematopoietic and marrow stromal cells promotes therapy-related myeloid neoplasms

GSE150019: Immunogenomic identification and characterization of granulocytic myeloid derived suppressor cells in multiple myeloma (RNA-Seq Neutrophils TGFbeta)

GSE150350: TEX15 is an essential executor of MIWI2-directed transposon DNA methylation and silencing.

GSE154316: Comparison of wild type and Tmem184b mutant adult DRG

GSE145525: Acute perturbation strategies in interrogating RNA Polymerase II elongation factor function in gene expression

GSE137457: The Mediator subunit MED23 regulates inflammatory responses and liver fibrosis

GSE147001: Cytosolic dsRNA-induced gene expression in mouse RAW24.7 macrophages and FIP200 knockout RAW cells

GSE147395: Two subsets of stem-like CD8+ memory T cell progenitors with distinct fate commitments in humans

GSE144125: Lack of TREM2 differentially affects the phenotype and transcriptome of mice expressing human APOE3 and APOE4

GSE147498: Long-term expansion with germline potential of human primordial germ cell-like cells in vitro [RNA-seq]

GSE154354: Evaluating developmental effects of Tmem184b in dorsal root ganglia

GSE111896: Single-cell transcriptomic analysis of tissue resident memory T cells in human lung cancer [ 10x genomics]

GSE141194: Protein arginine methyltransferase 5 promotes cholesterol biosynthesis mediated Th17 responses and autoimmunity [Th17]

GSE138756: SPC+ KP vs SPC+ KPG1 tumours

GSE150041: RNA sequencing study using Prox1-eGFP mice to investigate the role of lymphatic vasculature in chronic cardiac dysfunction

GSE147376: RNA-seq analysis of pulmonary arterial smooth muscle cells(PASMCs)stimulated with BMP9/10

GSE145546: Next Generation Sequencing Facilitates Quantitative Analysis of Taurine Promoted Transcriptomes

GSE108496: In vitro modeling of human germ cell development using pluripotent stem cells

GSE147474: Transcriptome analysis of the facial processes in Rspo2, WNT9b and Rspo2;Wnt9b double mutant mice

GSE147465: Transcriptomic analysis of tumor infiltrating CD8+ T cells during PDAC progression