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Sequencing-based assays (Page 109)

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Explore curated data sets and assays

Sequencing-based assays (Page 109)

GSE150996: Neutrophil gene expression in adult-onset Still's disease

GSE146378: Interleukin-1 promotes autoimmune neuroinflammation by suppressing endothelial heme oxygenase-1 at the blood-brain barrier

GSE151706: Epidermis Kif3a knockout transcriptome reveals genes involved in skin barrier homeostasis

GSE135584: Cytosolic Proteostatic Adaptation to Mitochondrial Stress Causes Progressive Muscle Wasting

GSE146887: Transcriptomic Characterization of Human Choroidal Neovascular Membranes Identifies Calprotectin as a Novel Biomarker for Patients with Age-related Macular Degeneration

GSE149884: The transcriptome of a murine model of melanoma initiation and progression unravels molecular signatures of phenotype switch and novel independent prognostic factors for melanoma patients

GSE147906: Anatomical locations of CD8+ memory T cells determine distinct mechanisms of reactivation I

GSE135648: An ontogenetic switch in the positive and negative selection of B cells [IgHEL]

GSE146402: Characterization of an Enzalutamide Resistant Primary Prostate Cancer Xenograft Derived from a Patient of West African Ancestry

GSE146845: Gender specific transcription regulation in the prefrontal cortex following social defeat stress

GSE147478: SWI/SNF complex mutations promote thyroid tumor progression and resistance to redifferentiation therapy (RNA-seq, Fig3)

GSE146425: Tcf1 and Lef1 regulate follicular helper T cell function eliciated by vaccination [RNA-Seq]

GSE154798: Hispidulin attenuates cardiac hypertrophy by improving mitochondrial dysfunction

GSE151631: RNA sequencing of corneas from two keratoconus patient groups identifies potential biomarkers and decreased NRF2-antioxidant responses

GSE146472: Adolescent Social Isolation Reprograms the Medial Amygdala: Transcriptome and Sex Differences in Reward

GSE154172: Heat shock protein gp96 induces Foxp3 expression in Regulatory T Cells via interaction with TLRs for treatment of Auto-immune Diseases [Foxp3Cre Myd88fl/fl]

GSE146495: T cell transcriptomes in the course of allogeneic hematopoietic stem cell transplantation

GSE149897: Negative feedback control of neuronal activity by microglia

GSE147327: Single-cell RNA sequencing of wildtype and miR-146a deficient T cells from mice treated with anti-PD-1 therapy

GSE154854: Single cell RNAseq analysis of organotypic brain slice microglia

GSE154092: A combination of growth factors and cytokines alter mouse fetal liver and placental gene expression profiles.

GSE139421: Investigating Global Changes in Gene Expression in a Murine Model of Cherubism

GSE146401: High throughput RNA sequencing of hepatocellular carcinoma and pre tumor samples from Tdg fl/-; UBC-cre/ERT2+ mice livers and their age/sex matched Tdg fl/fl controls livers

GSE147469: RNA Seqeuncing of Adult Tissue after Maternal Diet Manipulation

GSE151312: Effect of XCT790 on Human Aortic Valve (AV) Endothelial Cells (ECs) from Patients with Healthy Tricuspid, Calcified Tricuspid, or Calcified Bicuspid Avs

GSE146387: Stabilizing heterochromatin by ZKSCAN3 safeguards hMSCs from senescence

GSE147496: RNA-seq of primary mouse B cell progenitor populations after activation with LPS

GSE153521: Integrative profiling of early host chromatin accessibility responses in human neutrophils with sensitive pathogen detection [RNA-seq]

GSE135649: An ontogenetic switch in the positive and negative selection of B cells [B cell subsets]

GSE137321: c-Maf regulates the plasticity of group 3 innate lymphoid cells by restraining the type 1 program [RNA-seq]

GSE146912: Single-Cell Transcriptome Profiling of the Kidney Glomerulus Identifies Key Cell Types and Reactions to Injury

GSE137869: Caloric restriction reprograms the single-cell transcriptional landscape of Rattus norvegicus aging

GSE149947: Gene expression classifiers identify bacterial and viral etiologies of acute respiratory illness in Sri Lanka.

GSE135703: Characterizing adult cochlear supporting cell transcriptional diversity using single-cell RNA-Seq: Validation in the adult mouse and translational implications for the adult human cochlea

GSE148292: Effects of BMPER, CXCL10 and HOXA9 on neovascularization during early-growth stage of primary high-grade glioma

GSE148347: High-throughput automated organoid culture via stem-cell aggregation in microcavity arrays

GSE150243: Differential gene expression of neutrophils that lack lymphotoxin beta receptor identifies a metabolic gene signature

GSE150069 (mouse): Development and Application of a Transcriptomic Signature of Bioactivation in an Advanced In Vitro Liver Model to Reduce Drug-induced Liver Injury Risk Early in the Pharmaceutical Pipeline

GSE146371: Analysis of Transcriptome in hematopoietic stem cells after radiation injury with treatment of EGF or saline

GSE146731 (mouse): Histone H3.3G34-mutant interneuron progenitors co-opt PDGFRA for gliomagenesis

GSE148356: bulk mRNA sequencing of splenic Red Pulp Fibroblasts (RPF) and lymph node Fibroblastic Reticular Cells (FRC)

GSE148510: RNA-sequencing of Wild-type and Bmal1 KO M1 macrophages

GSE154216: Paired Box 9 (PAX9), the RNA polymerase II transcription factor, regulates human ribosome biogenesis and craniofacial development (RNA-seq)

GSE135710: Single-cell RNA-seq of B cell polustion in breast cancer patients

GSE147366: RNA sequencing of HAP1 WT and MED13 KO clones

GSE146747: Regulation of Ag-activated B cells by Nur77/Nr4a1

GSE147778: Protein Kinase / suppresses liver cancer by repressing autophagy and oxidative phosphorylation in hepatocytes [RD]

GSE148849: Gene Expression Analysis of the response to ACC inhibition

GSE145284: The omentum of obese girls harbors small adipocytes and browning transcrips

GSE135667: Col6a1-/- Mouse Lung

GSE146470: The lipid handling capacity of subcutaneous fat is programmed by mTORC2 during development

GSE147339: Inflammasome Signaling and Impaired Vascular Health in Psoriasis

GSE154211: RNA-Seq analysis of HCV-related HCC and NBNC-HCC tumor and non-tumor part gene analysis

GSE149887: Differential gene expression in mouse myeloid cells

GSE147608: Transcription profiling of monocytes from patients with active and inactive systemic juvenile idiopathic arthritis.

GSE147368: Functional characterization of the novel GWAS-identified GP2 coding variant

GSE138753: CC10+ KP vs CC10+ KPG1 tumours

GSE137347 (mouse): The transcriptomic landscape of MAIT cell development in the thymus (NN41 RNAseq data set)

GSE147743: RNA stability measurements in RBMS1 knockdown cells and control cells

GSE145347: Single Cell RNA sequencing of MAFB +/+ and -/- cells at the pancreatic progenitor and beta-like stages

GSE137398: Single-cell profiles of retinal neurons differing in resilience to injury reveal neuroprotective genes - Time course of transcriptomic changes in single retinal ganglion cells following optic nerve crush

GSE148411: RNA sequencing data of microglia isolated from brains of WT, Hexb-tdTomato, Hexb-CreERT2 and Hexb-KO mice. [Hexb-KO]

GSE150238: An allosteric/intrinsic mechanism supports termination of snRNA transcription.

GSE140779: A mammalian Wnt5aRor2Vangl2 axis controls the cytoskeleton and confers cellular properties required for alveologenesis

GSE135841: Epigenetic priming by Dppa2/4 in pluripotency facilitates multi-lineage commitment

GSE146915: RNA-seq from lung E18.5

GSE150020: Immunogenomic identification and characterization of granulocytic myeloid derived suppressor cells in multiple myeloma (RNA-Seq Epigenetic treatments)

GSE151648: Transcriptomics of Human Liver Ischemia and Reperfusion Injury

GSE135819: GDE3 regulates oligodendrocyte precursor proliferation via release of soluble CNTFR

GSE147346: mRNA sequencing of stem cell-derived beta cells before and after transplantation in mice

GSE140822: Astrocyte layers in the mammalian cerebral cortex revealed by a single-cell in situ transcriptomic map

GSE146452: Reduced Type I Interferon response signature detected in dendritic cells from prediabetic NOD mice compared to C57BL/6.g7 and Rag KO [stimulated samples]

GSE154918: RNAseq analysis of blood from sepsis patients and healthy controls

GSE147404: Gene expression in human embryonic stem cells (hESCs) upon the differentiation to neural lineages by timed delivery of retinoic acid

GSE149888: RNA-sequencing of adipose-derived stem cells in 0 or direct-current electric field

GSE147990: SFR KO mice germinal center B cell RNA sequencing

GSE151666: RNA sequencing of pre-treatment primary cervical cancer

GSE146403: Loss of the nuclear protein RTF2 enhances influenza replication