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Sequencing-based assays (Page 81)

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Explore curated data sets and assays

Sequencing-based assays (Page 81)

GSE117470: Tissue signals imprint ILC2 identity with anticipatory function [RNA-Seq]

GSE126940: p53 activates the long noncoding RNA Pvt1b to inhibit Myc and suppress tumorigenesis

GSE126939: Small Heterodimer Partner and Fibroblast Growth Factor-19 Inhibit Intestinal Npc1l1 Expression and Cholesterol Absorption

GSE123894: Differential Metabolic and Multi-tissue Transcriptomic Responses to Fructose Consumption among Genetically Diverse Mice [Liver]

GSE116105: Transcriptional profiles of IL-4 stimulated mouse peritoneal macrophages derived from different cellular lineages and of different genetics backgrounds

GSE126879: Suppressive function of MDSC is under bidirectional control of intrinsic and immunotherapy-induced type I IFN in pancreatic cancer

GSE126973: Transcriptome analysis of various TOX+ and TOX- tumor-infiltrating CD8 T cells and in vitro TOX over-expressing T cells.

GSE114624: Differential Expression of Immune Related Genes in Taste Buds of Fed and Fasted Mice

GSE137989: RNA-seq of mouse small intestine samples from different treatment groups

GSE124881: FoxP3 and Ezh2 Regulate Tfr cell Suppressive Function and Transcriptional Program [Ezh2]

GSE133928: A topological atlas reveals layers of genome reorganization in colorectal cancer

GSE115401: Impaired immune surveillance accelerates accumulation of senescent cells and aging [RNA-seq]

GSE114608: Genome-wide maps of gene expression in alkaline sphingomyelinase knockout mice

GSE126174: Bcor loss perturbs myeloid differentiation and promotes leukaemogenesis [20wRNA-seq]

GSE129935: RNA sequencing human monocytes

GSE113914: Uhrf1 regulates active transcriptional marks at bivalent domains in pluripotent stem cells through Setd1a [RNA-Seq]

GSE132877: RNA-Seq profiling of BIN1 knock-out mouse microglia cells

GSE113691: Glucocorticoid receptor dimers control intestinal STAT1-mediated IFN- and TNF-induced inflammation in mice

GSE120404: A neutropenia-associated transcription factor mutation differentially impacts target genes in the cell-states traversed during granulocyte specification and commitment [Gfi1-R412X-HMZ]

GSE133887 (mouse): Compensatory Csf2-driven macrophage activation blunts long-term efficacy of therapeutic Csf1r inhibition in breast-to-brain metastasis

GSE130125: Delineating the molecular pathways regulated by IFN-gamma and IL-17 in the small intestines of humanized mice during staphylococcal superantigen-induced toxic shock syndrome

GSE127161: Transcriptome profiles of distinct mechanoreceptive somatosensory neuron subtypes

GSE128255: Norrie Disease Protein (NDP) gene knockdown patient-derived glioblastoma stem cell lines

GSE128154: Integrative proteomics reveals increased non-degradative ubiquitylation during CD4+ T cell activation

GSE138529: Long-range Pitx2c Enhancer Promoter Interactions Prevent Predisposition to Atrial Fibrillation [RNA-seq]

GSE131602: antigenic KPC model_bulk pancreas RNASeq

GSE124872: Multi-modal analysis of the aging mouse lung at cellular resolution

GSE125016: Both Fallopian Tube and Ovarian Surface Epithelium Can Act as Cell-of-Origin for High Grade Serous Ovarian Carcinoma

GSE133922: Global transcriptomic profiling of the bone marrow stromal microenvironment during postnatal development, aging, and inflammation

GSE130127: Genome-Wide Transcriptome Analysis Reveals Intermittent Fasting-Induced Metabolic Rewiring in the Liver

GSE113280: Single cell RNAseq of Wild Type and IL27ra KO Tumor infiltrating lymphocytes isolated from B16F10 melanoma batch 2

GSE124868: Expression profiling of microglia lacking Tgfbr2

GSE134355: Construction of A Human Cell Landscape by Single-cell mRNA-seq

GSE127004: SETD5 is a H3K36 methyltransferase which preserves transcriptional fidelity during brain development and neuronal wiring [RNA-seq]

GSE113858: Next Generation Sequencing Facilities Quantitative Analysis of Wild type CD8+ T cells with 0.3T static magnetic field or not

GSE135662: Next-generation sequencing of RNA samples from the mice heart of Control, ABHD5-KO and ABHD5-KO transduced with AAV9 expressing HDAC4-NT (AAV9-NT)

GSE113707: Postprandial FGF19 signaling-induced phosphorylation of FXR by Src modulates its activity in bile acid homeostasis

GSE126407: Vasculature-associated fat macrophages readily adapt to inflammatory and metabolic challenges

GSE127106: Dynamic allelic imbalance in early mouse embryo

GSE115865: Neurotropism and Neurotoxicity Comparison among Retrograde Viral Tracers and Their Combinational Application in High-order Circuit Tracing

GSE129586: Transcriptome analysis of pineal glands in a mouse model of Alzheimers disease

GSE126279: Local administration of IFN--iPSC-pMCs alters gene expression profiles in tumor microenvironment.

GSE126899: Dietary intake regulates the circulating pro-inflammatory monocyte pool

GSE126395: Characterisation of the EZH2 regulated transcriptome in de novo transformed cells (RNA-Seq)

GSE113974: Sorting leukemia initiating cells from adult and neonatal leukemia

GSE115204: E-cadherin bridges cell polarity and spindle orientation to ensure prostate epithelial integrity and prevent carcinogenesis in vivo

GSE114079: Smad4 deficiency impairs chondrocyte hypertrophy via the Runx2 transcription factor in mouse skeletal development [RNA-seq]

GSE126277: IFN--producing proliferating myeloid cells reveal type I IFN-stimulating gene signature

GSE126402: Negative regulation of lymphoid specification by the transcription factor TAL1

GSE113733: Next-generation sequencing analysis of chemically induced neurons from wild type (WT), Actb+/- (HET) and Actb-/- (KO) mouse embryonic fibroblasts (MEFs)

GSE129831: Outcomes of MSL2 domain-swap mutation in mouse embryonic stem cells

GSE124876 (mouse): Transcriptomic analysis of primary human T cells and murine RAW 264.7 macrophages 3D cultured in different collagen densities

GSE132044 (mouse): Systematic comparative analysis of single cell RNA-sequencing methods

GSE113761: RNA-Seq transcriptome profiling of embryonic age 17.5 or E17.5 ventricles of cardiac specific-estrogen-related receptor alpha and gamma (ERRa/g) knock out (KO) mouse generated by Nkx2.5-Cre driver and its control wild type.

GSE124745: The Tug1 locus is required for male fertility and comprised of DNA, RNA and Protein regulatory elements

GSE114091: A chromatin modulator sustains self-renewal and enables differentiation of postnatal neural stem cells

GSE125380: eIF4A supports an oncogenic translation program in pancreatic ductal adenocarcinoma

GSE128147: Single-Cell Transcriptome Analysis Of CD8+ T-cell Memory Inflation

GSE113982: A radical switch in clonality reveals the formation of a stem cell niche in the epiphyseal growth plate

GSE115903: Understanding Early Stage Myelodysplastic Syndrome Pathobiology

GSE121288: Bmi1 suppresses adipogenesis in the hematopoietic stem cell niche: RNA-Seq

GSE145062: KDM3A/Ets1/MCAM axis promotes growth and metastatic properties in Rhabdomyosarcoma.

GSE126753: CAR T cell trogocytosis and cooperative killing regulate tumour antigen escape

GSE134456: Next generation sequencing facilitates the mapping of the transcriptomes of two E3 ligase knock out macrophages

GSE113857: PDGFB-expressing MSCs improve human hematopoietic stem cell engraftment in immunodeficient mice

GSE113876: CD47 in the tumor microenvironment and CD47 antibody blockade regulate natural killer cell recruitment and activation

GSE114956: Robust apoptotic and microglial responses to brain somatic genome damage following Casc5 deletion

GSE126762: RNA Sequencing Facilitates Quantitative Analysis of Albumin-Cre (Control, Ctl) and Liver-specific Klf15 Knockout (Li-KO) Mouse Liver Transcriptomes

GSE121364: Ageing affects DNA methylation and transcriptional cell-to-cell variability in muscle stem cells [scRNA-seq]

GSE130128: Intrahepatic lipocalin 2 promotes liver fibrosis in alcoholic hepatitis [RNA-Seq]

GSE130490: Context-dependent requirement of H3K9 dimethyltransferase activity during reprogramming to pluripotency

GSE138253: Differential transcriptional responses to cardiomyocyte-specific Notch activation in right versus left atria of murine cardiac tissue

GSE128153: RNA sequencing of mTC and mTN cells

GSE124904: Single-Cell RNA-seq Transcriptome Profiling from Male Germ Cells Isolated from Late Fetal and Neonatal Mouse Testes

GSE124952: Cell type-specific transcriptional programs in mouse prefrontal cortex during adolescence and addiction

GSE142261: Ultra-Processed Foods drive Intestinal Barrier permeability increasing Microvascular Disease risk

GSE115226: The HDAC3 Enzymatic Activity Regulates Skeletal Muscle Fuel Metabolism

GSE138272: FOXP3 protects conventional human T cells from premature restimulation-induced cell death