Explore curated data sets and assays

Pluto has a large database of published data, available to explore, conduct your own analysis, and view QC reports.

Sequencing-based assays (Page 56)

Store large, raw sequencing data files and transform them into biologically-meaningful results in your browser. Gain critical QC information, quantify targets within and across data sets, and run best-in-class computational biology analyses specific to each assay type.

Explore curated data sets and assays

Sequencing-based assays (Page 56)

GSE103327: Transcriptome profiling of HepG2 cells upon treatment of the menin-MLL inhibitor MI-503 or DMSO

GSE119470: Animal model of acute-on-chronic alcoholic liver injury

GSE107159: Role of myelin-derived antigens in pain: a female connection

GSE106445: Transcriptome analysis of satellite cells with a genetic deletion of HDAC4 to identify the gene modulated by HDAC4

GSE101732: RNA-sequencing of Mbd3-null and control haematopoietic stem cell and lymphoid progenitor cell populations

GSE57433: Human Nonsense-Mediated RNA Decay Initiates Widely by Endonucleolysis and Targets snoRNA Host Genes

GSE102992: Transcriptomic response to 24-hour food deprivation in four hypothalamic nuclei in Snord116 deletion mice

GSE102158: Lnc-31 acts as a molecular scaffold to control the Rock1 mRNA translation

GSE103355: RNA sequencing of lung tissue from Fra-2 transgenic mouse (Fra-2tg) and wild-type littermates

GSE93034: A protective function of IL-22BP in acute liver injury

GSE99888: Singlecell transcriptomic analysis of mouse CA1 inhibitory neurons

GSE106226: Multi-axial self-organisation properties of mouse embryonic stem cells into gastruloids [individual]

GSE102118: Genomic signatures of platinum re-sensitization in ovarian cancer [RNA-Seq]

GSE103069: Comparing expression in livers of 1-month vs 6-month old mice

GSE94133: BET-Bromodomain Inhibitors Engage The Host Immune System And Regulate Expression Of The Immune Checkpoint Ligand PD-L1 [EuMyc_RNA-seq]

GSE100277: Next-generation sequencing measuring mRNA expression in nave T cells isolated from Mettl3 KO and WT mice

GSE110046: Impaired TNFa-driven dendritic cell activation limits LPS-induced protection from asthma in infants.

GSE101838: Rlim-independent XCI in female embryonic stem cells in vitro

GSE102171: Concomitant Loss of Smad4 and Activation of Wnt Signaling Triggers Enterocyte De-differentiation and Adenoma Formation

GSE105223: Exacerbating role of angiopoietin-2 in cardiac hypoxia and inflammation after myocardial infarction

GSE111855: Learning the cis sequence elements that determine AP-1 monomer specificity (RNA-seq data sets)

GSE102182: Developmental stage specific chromosome architecture in human erythroid cells (RNA-seq)

GSE102309: Transcriptome of neutrophils deficient in cxcr4 and arntl

GSE105267: Expression data of endothelium and hematopoietic cluster cells in the wild type and Steel mutant E11.5 AGM and vitelline and umbilical arteries

GSE106810: LINE-2 transposable elements are a source of functional human microRNAs and target sites

GSE108184: c-Maf-dependent regulatory T cells mediate immunological tolerance to a gut pathobiont

GSE100898: Cry2 is critical for circadian regulation of myogenic differentiation by Bclaf1-mediated mRNA stabilization of cyclin D1 and Tmem176b

GSE101915: Species and Cell-Type Properties of Classically Defined Human and Rodent Neurons and Glia [Mouse RNA-Seq]

GSE106362: PTEN loss in the fallopian tube induces hyperplasia and ovarian tumor formation

GSE103070: Transcriptome profile of wildtype and Ret homozygote null mouse guts at E10.5 ,E12.5 and E14.5

GSE94132: Effect of Praziquantel on the Differential Expression of Mouse Hepatic Genes and Parasite ATP Binding Cassette Transporter Gene Family Members During Schistosoma mansoni Infection

GSE101108: Transcriptomic and genomic profiling of early-stage ovarian carcinomas associated with histotype and overall survival [RNA-Seq]

GSE96586: Murine Norovirus Infection Initiates Interferon and TNF Signaling with Significant Alteration of Lipid and Cell Cycle Homeostasis

GSE103353: The mRNA alteration in HT22 cells induced by the overexpression of long noncoding RNA AK046375

GSE123669: Immature low-density neutrophils exhibit metabolic flexibility that facilitates breast cancer liver metastasis

GSE109906: RNAseq of cortex of 6-month old APPPS1 and APPPS1;Apoe-/- mice

GSE100634: Transcription factor Foxo1 is essential for IL-9 induction in T helper cells

GSE105164: Wnt inhibition confers hESCs a unique transcriptional state compatible with differentiation, but not with derivation

GSE100471: Defining the early steps of cardiovascularlineage segregation by single cell RNA-seq

GSE102729: RNA sequencing (RNA-SEQ) of Human endothelial cells (HUVEC) in LFS, sFRP2OE, and WT conditioned media

GSE104044: System-wide Dissection of the Transcriptional Response to RUNX1 During Hematopoietic Specification [RNA-seq]

GSE123674: Axl targeting in experimental unilateral ureteral obstruction

GSE100981: Mesenchymal Igf2 is a major regulator of pancreatic growth and function

GSE101905: Transient and permanent reconfiguration of chromatin and transcription factor occupancy drive reprogramming

GSE102335: Microglia innatly develop within cerebral organoids

GSE97399: Transcriptional profiling of quiescent muscle stem cells in vivo

GSE103203: Endometrial epithelial cell transcriptome response to co-culture with adipose stromal cells

GSE107915: Loss of Capicua alters early T cell development and predisposes mice to T cell lymphoblastic leukemia/lymphoma

GSE94990: A Reciprocal Regulatory Loop Between TAZ/YAP and G protein Gs Regulates Schwann Cell Proliferation and Differentiation

GSE120647: Glioblastoma multiforme cancer stem cells from different patients exhibit consistent gene expression changes following Hes3 RNA interference

GSE104458: Metformin induces chromosome reorganization and changes in gene expression in normal human fibroblasts

GSE103383: RNA Seq analysis of pancreatic beta cell transcriptome during dedifferentiation

GSE102215: RNA-Seq in neutrophils from Antiphospholipid Syndrome

GSE105160 (mouse): RNASeq of mouse, human, and non-human primate primary dermal fibroblasts to poly(I:C) transfection

GSE70068: RNA-Seq analysis of human neutrophils isolated by different protocols (Polymorphprep and negative selection) and incubated with and without in vitro cytokine stimulation

GSE101657: Gene expression changes in ketogenic and high-fat diets

GSE102728: IgG immunocomplexes sensitize human monocytes for inflammatory hyperactivity via transcriptomic and epigenetic reprogramming in autoimmune disease

GSE122780: Identification of distinct murine brown adipocyte lineages

GSE107391: Integrated Genetic and Proteomic Analysis Identifies PLK1 as a Candidate Therapeutic Target for SETD2-Deficient Clear Cell Renal Cell Carcinoma

GSE101292: Allele-specific expression profiling of imprinted genes in mouse isogenic pluripotent tissues and cell lines

GSE113878: transcriptional response to endothelial cell-specific inactivation of Tspan12 in the mature retina

GSE106805: DNA methylation regulates the neonatal CD4+ T-cell response to pneumonia in mice

GSE140380: Transcriptional differences between skin from patients with atopic dermatitis and control skin obtained from the healthy margins of Mohs surgery patients

GSE101585: Aberrant expression profile of lncRNA and mRNA in dilated cardiomyopathy by RNA-sequence

GSE106514: Single-cell analysis reveals heterogeneity of high endothelial venules and different regulation of genes controlling lymphocyte entry to lymph nodes

GSE122346: The epigenetic regulator ATF7 controls adipocyte differentiation and thermogenic gene program

GSE101968: Obstructed defecation an enteric neuropathy? An exploratory study of patient samples

GSE100408: Probing the Roles of SUMOylation in Cancer Cell Biology Using a Selective SAE inhibitor

GSE101730: The histone methyltransferase G9a is required for silencing of helper lineage genes in CD8+ T cells

GSE101921: Distinct roles of cohesin-SA1 and cohesin-SA2 in 3D chromosome organization

GSE103566: Transcriptional coactivator PGC-1 contains a novel CBP80-binding motif that orchestrates efficient target gene expression

GSE104973: Comparison of RNA-seq and Microarray Platforms for Splice Event Detection using a Cross-Platform Algorithm [RNA-Seq]

GSE119443: RNA-seq of WT, Tet1-/-, Tet2-/-, Tet1-/-:Tet2-/- (DKO), and Tet1-/-:Tet2-/-:Tet3-/- (TKO) murine embryonic stem cells following six days of LIF withdrawal.

GSE123972: RNA-seq analysis of hepatocellular carcinoma plasma

GSE101972: RNA-seq analysis of the role of HBO1 (KAT7/MYST2) in the ovarian cancer cell line UWB1.289.

GSE108787: Temporal dynamic reorganization of 3D chromatin in hormone-induced breast cancer and endocrine resistance

GSE140389: Effectof high fat diet on phenotype, brain transcriptome and lipidome in Alzheimer's model mice

GSE94386: RNA editing is the essential function of ADAR1 and, in the absence of MDA5, is dispensable for normal adult homeostasis [mmPCR-seq]