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Sequencing-based assays (Page 13)

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Explore curated data sets and assays

Sequencing-based assays (Page 13)

GSE87758: Intersectionally labeled Drd2-Pet1 single-neuron RNA-seq

GSE88777: Deep Sequencing analysis of the total RNA state and the polyadenylation state of mRNAs in Scrambled or CNOT7 knockdown neurons

GSE157077: Reshaping Circadian Metabolism in the Suprachiasmatic Nucleus and Prefrontal Cortex by Nutritional Challenge

GSE87608: Next-Generation Sequencing Supports Quantitative Analysis of Wild Type and Runx2+/- Calvarial Transcriptomes With or Without Administration of MS-275

GSE79729: RNA-seq analysis of in vivo- and in vitro-produced mouse oocytes

GSE95649: Mir-132/212 shapes age-dependent transcriptome and is required for binocular matching of orientation preference and depth perception.

GSE109903: Generation of matched patient-derived xenograft in vitro-in vivo models using 3D macroporous hydrogels for the study of liver cancer [RNA-seq]

GSE88779: Mouse Pancreatic Islet Maturation Time Series

GSE86151: Targeting the Creatine Kinase Pathway in EVI1-Positive Acute Myeloid Leukemia

GSE135690: Impact of sevoflurane priming on B16F10 transcriptome after in vivo growth

GSE119441: The effects of perfluorooctanoate on high fat diet induced non-alcoholic fatty liver disease in mice

GSE98003: Bptf maintains chromatin accessibility and the self-renewal capacity of mammary gland stem cells [RNA-Seq]

GSE100332: Next-generation sequencing measuring ribosome mRNA occupancy and translation efficiency in CD4+ T cells isolated from Mettl3 KO and WT mice

GSE89989: RNA-seq data from T cells in vitro

GSE93374: A Molecular Census of Arcuate Hypothalamus and Median Eminence Cell Types

GSE94239: RNAseq analysis of GL261 GDC and mNS GSC transcriptome

GSE90013: HBEC-shp53-PCHD7

GSE95056: Differential requirement for functional telomeres in neurons

GSE93379: Gene expression profile (RNA-seq) of hypophysectomized male mouse liver treated with a single pulse of growth hormone (GH)

GSE90929: Transcriptional changes in the primary somatosensory cortex upon sensory deprivation

GSE89991: RNA-Seq in PWS iPSC-derived neurons

GSE90468: Retinoic Acid Induced Transcriptional Repressor HIC1 is Required for Suppressive Function of Human Induced Regulatory T cells [RNA-Seq 1]

GSE99479: A class of GATA3 mutation reprograms the breast cancer transcriptional network through gain and loss of function

GSE97215: Genetic-to-epigenetic Therapy for Pancreatic Cancer

GSE93179: Tau-P301L sorted cell types

GSE94685: RNA-sequencing of lung ECs isolated at P5 from mice with EC-specific deletion of LATS1/2 and LATS1/2;YAP/TAZ

GSE93594: Transcriptome-wide identification of CELF2 functional targets in T cells

GSE98877: Commensal microbiota modulate gene expression in the skin

GSE99265: MicroRNA-183 cluster continuously scales mechanical pain sensitivity by regulating basal and neuropathic pain gene pathways.

GSE92892: Generation of muscle stem cells from pluripotent stem cells

GSE80804: A Pro-Asthmatic IL-4 Receptor Allele Promotes Airway Inflammation by Programming TH17 Cell-Like Regulatory T cells

GSE90889: Expression data for hiPSC-derived RPE treated with 10mM Nicotinamide or vehicle

GSE89132: Study on the effects of cytoskeletal modifying compounds on stem cell differentiation

GSE93230: Brown adipocytes can display a mammary basal myoepithelial cell phenotype in vivo

GSE112261: RAC-GEF function as a critical factor in intestinal tumourigenesis

GSE93610: Time-course expression data from HEK293RAF1:ER cells stimulated with 4OHT and labelled with 4SU

GSE93385: Differential responses of human fetal brain neural stem cells to Zika virus infection

GSE95154: Gene expression profile of neurons expressing protein kinase C (PKC) or somatostatin (SST) in the central amygdala (CEA) of mice

GSE125268: RNAseq profiling of miR-132/212-deficient CD4+ T cells activated in vitro and in vivo.

GSE93070: Virus Mimicry in the Tumor Microenvironment Activates RIG-I Through Unshielding of Endogenous RNA in Exosomes [exoRNA-Seq]

GSE93598: Genome-wide analysis reveals dual roles for Ikaros in regulation of macrophage chromatin state and inflammatory gene expression [RNA-seq]

GSE93057: RNAseq analysis of patient-derived luminal breast cancer xenografts treated with progestins

GSE139905 (mouse): Transcriptome upon PDXK knock-out in mouse and human leukemic cells

GSE94852: Radiation Induced Pulmonary Fibrosis as a Model of Progressive Fibrosis: Contributions of DNA Damage, Inflammatory Response and Cellular Senescence Genes

GSE82002: The methyltransferase Setdb1 is essential for meiosis and mitosis in mouse oocytes and early embryo

GSE83697: Tbet regulates the transcriptional programming of Be1 B cells.

GSE93072: Virus Mimicry in the Tumor Microenvironment Activates RIG-I Through Unshielding of Endogenous RNA in Exosomes [patients RNA-Seq]

GSE88778: Virgin Beta Cells Persist throughout Life at a Neogenic Niche within Pancreatic Islets

GSE87487: Genes encoding cognate receptors for IRI-related recipient cytokines are expressed in donor livers

GSE87785: Sequencing-based analyses characterize a tumor suppressive role of mir-1271 repressed by DNA hypermethylation in gastric cancer

GSE98041: Diurnal liver transcriptome in wt and nono-/- mice

GSE93071: Virus Mimicry in the Tumor Microenvironment Activates RIG-I Through Unshielding of Endogenous RNA in Exosomes [RNA-Seq]

GSE99944: Effect of digoxin treatment on the gene and alternative splice expression in human pluripotent stem cells- derived mesenchymal stem cells

GSE119499: Comparative transcriptomic analyses provide insights into key genes involved in niche-associated functions of primary murine LEC and BEC in homeostasis

GSE93143: Full-coverage landscape of extracellular RNAs, coding and non-coding, secreted by human glioma stem cells

GSE87849: The Nature and Nurture of Cell Heterogeneity: Accounting for Macrophage Gene-environment Interactions with Single-cell RNA-Seq

GSE119484: Hif-1alpha deletion leads to adverse treatment efficacy in a mouse model of MLL-AF9 driven AML

GSE93153: The Smc5/6 Complex Restricts HBV when Localized to ND10 without Inducing an Innate Immune Response and is Counteracted by the HBV X Protein Shortly after Infection

GSE84468: Tumor-derived prostaglandin E2 promotes p50 NF-B-dependent differentiation of monocytic MDSC.

GSE87899: Identification of Novel Targets of Diabetic Nephropathy Using RNA-seq

GSE94814: RNA-seq analysis of WT vs. Reck vascular KO P0 mouse brains

GSE87531: Effects of aged garlic extract (AGE) and FruArg on lipopolysaccharide-induced genetic response in microglial cells using gene expression profiling

GSE95601: Olfactory stem cell differentiation: horizontal basal cell (HBC) lineage

GSE95852: Gene expression profiles in retinas from miRNA183/182/96 cluster knockout mice versus wild type controls by RNA-seq

GSE93585: Transcriptome analysis of the effect of DAPT in GHMT-induced cardiac reprogramming

GSE88802: Novel metastatic models of human esophageal adenocarcinoma highlight the importance of E-cadherin in cancer metastasis

GSE92340: Patient iPSC-Derived Neurons for Disease Modeling of Frontotemporal Dementia with Mutation in CHMP2B

GSE94982: Landscape of translation in mouse tissues

GSE87517: Immune escape in breast cancer during in situ to invasive carcinoma transition

GSE90813: Single cell analysis of SFTPC+ cells and CPM-high progenitor cells derived from human induced pluripotent stem cells (hiPSCs)

GSE88858: RNA-Seq gene profiling comparison from human cDC subsets and pre-cDC subsets

GSE92865: Single-cell RNA-seq of Lgr5-eGFP+ intestinal stem cells upon Wnt and R-spondin modulation in vivo

GSE101623: The neuropeptide Neuromedin U stimulates innate lymphoid cells and promotes type 2 inflammation [ILC2 and ILC3]

GSE95631: Programed cell removal of Neutrophils regulated by calreticulin

GSE88905: Genome-wide effect of AML engraftment on bone marrow endothelial cells

GSE101745: FGF-13 promotes metastasis in triple-negative breast cancer

GSE109936: Establishment of novel atopic dermatitis model by Nestin-cre mediated Ikk2 deficiency

GSE94893: RNA-seq analysis in dermis and epidermis of WT (control), LSL-Shh (Shh overexpression in epidermis), and E14.5d skin