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Sequencing-based assays (Page 12)

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Explore curated data sets and assays

Sequencing-based assays (Page 12)

GSE87130: Transcriptional profiling of Regulatory T-cells isolated from neonatal skin and skin draining lymph nodes (SDLNs)

GSE85623: Disease Model of GATA4 Mutation Reveals Transcription Factor Cooperativity in Human Cardiogenesis [RNA-Seq]

GSE86337: Transcriptome profiling of 5 human adenocarcinoma cell lines

GSE140852: RNA-seq of NIH3T3 cells treated with PBS or extracellular vesicles (EV) from MCF10A or MDA-MB-231 cells

GSE85656: RNAseq analysis of lncRNA silenced primary melanoma cell line WM902B

GSE87189: The anti-leukemic effect of R-2HG depends on its acting as an m6A mRNA modifier-RNA Seq-PBS / R-2HG treatment

GSE98032: SiO2 Nanoparticles Modulate The Electrical Activity Of Neuroendocrine Cells Without Exerting Genomic Effects

GSE148410: RNA sequencing data of microglia isolated from brains of WT, Hexb-tdTomato, Hexb-CreERT2 and Hexb-KO mice. [Cre]

GSE99434: AP4 regulates stem and Paneth cell homeostasis and promotes adenoma initiation in the intestine (small intestinal organoid)

GSE87200: Aurora B phosphorylates hnRNP U/SAF-A to facilitate XIST RNA removal from the inactive X chromosome during mitosis

GSE122468: RNA-Seq of PreCFU-E and CFU-E progenitors from wild type and Scf mutants

GSE79408: Omega-6 and omega-3 oxylipins are implicated in soybean oil-induced obesity

GSE90796: RNA-sequencing of human intestinal enteroids infected with or without human rotavirus (strain Ito)

GSE87198: RNA sequencing quantitative analysis of RNA editing levels in ADAR1, ADAR2, AIMP2 overexpression and wild type HEK293 cells

GSE90749: Induced Pluripotent Stem Cell Differentiation Provides an Approach for Functional Validation of GWAS Variants in Metabolic Disease

GSE87681: Analysis of gene expression from CD45neg cells of lung tumors upon neutrophil depletion or not

GSE98198: MYOD Gene Expression Regulation during Myogenic Conversion of Fibroblasts

GSE87426: RNA-seq of human adipose tissue following n-3 PUFA supplementation and evoked endotoxemia

GSE108254: Gain of function of the ATXN1-CIC complex drives cerebellar pathology in Spinocerebellar ataxia type 1 (part 1)

GSE120370: The tissue factor-thrombin axis drives pancreatic ductal adenocarcinoma through tumor cell-derived PAR-1

GSE89378: Single-cell and bulk RNA-seq of sorted and micro-dissected mouse bone marrow and fetal liver cells

GSE87701: Effects of plasticizers (bisphenol A, bisphenol AF) and an herbicide in MCF7 human breast cancer cells

GSE79519: The dual role of LSD1 and HDAC3 in STAT5-dependent transcription is determined by protein interactions, binding affinities, motifs and genomic positions [RNA-seq]

GSE87273: C9/ALS Human Embryonic Stem Cells and C9/ALS Induced Pluripotent Stem Cells

GSE88944: High-Throughput Screening of Human Induced Pluripotent Stem Cell Cardiomyocytes Predicts Tyrosine Kinase Inhibitor Cardiotoxicity

GSE99309: Hepatic glucocorticoid receptor transcriptome profiling in normal and hypogonadal females

GSE87476: Mitotic Transcription and Waves of Gene Reactivation During Mitotic Exit

GSE87694: Olfactory receptor accessory proteins play crucial roles in receptor gene choice

GSE80732 (mouse): Global transcriptional analysis of human extended pluripotent stem cells, human primed pluripotent stem cells, mouse extended pluripotent stem cells, and mouse embryonic stem cells by RNA-seq

GSE109895: Resident effector memory Tregs of the uterus regulate trophic functions during mouse early pregnancy

GSE132494: Dynamic Lineage Priming by ERK is Driven by Transcription Factor-Independent Enhancer Regulation [Med24_KO]

GSE87290: RNA-seq of human peripheral blood mononuclear cells

GSE99338: RNAseq analysis of wildtype and Nrf2-/- advanced lung tumors

GSE99352: Lower motor neuron transcriptomic analysis of a TDP-43 Q331K knockin mouse

GSE93331: Transcriptional profile of Krt15- and Krt15+ basal cells in mouse esophageal epithelium

GSE87299: Transcriptome changes in mouse livers upon Bmal1 or Nr1d1 knock out and interactome of lnc-Crot by 4C-seq

GSE92622: Expression profiling of mouse primary prostate cells from WT mice

GSE124599: RNA-seq data for tumor tissues from mice fed with normal diet (ND) or high cholesterol diet (HCD) [Hep1-6]

GSE87315: Identification of PU. 1 target genes in mouse developing pro-B cells

GSE87821: Cooperation between the pioneer factor OCT4 and chromatin remodeller BRG1 matures transcription factor binding in embryonic stem cells [RNA-Seq]

GSE93796: mRNA-Seq of the CA1 hippocampal subregion from 3 month old animals injected with JQ1 (50mg/kg) i.p. and mRNA-Seq of CA1 of 8-10 month old APP/PS1-21 transgenic animals injected with JQ1 (50mg/kg) i.p.

GSE87519: RNA-Seq Analysis of Dose-Dependent TCDD-Elicited Hepatic Gene Expression in Male Mice

GSE80990: Mitochondrial retrograde signaling in mammals is mediated by the transcriptional cofactor GPS2 via direct mitochondria-to-nucleus translocation [GRO-seq]

GSE87321: Complete atrio-ventricular canal defects in mouse hearts lacking G-protein receptor kinases

GSE88943: Gene expression profiling associated with knockdown of RNF20 in human normal and malignant lung epithelial cell lines

GSE79796: Cripto is essential to capture mouse epiblast stem cell and human embryonic stem cell pluripotency

GSE90087: LMO1 Synergizes with MYCN to Promotes Neuroblastoma Initiation and Metastasis

GSE87824: Systematic identification and comparison of expressed profiles of lncRNAs and circRNAs in male and female germline stem cells

GSE99454: Cellular responses to human cytomegalovirus infection.

GSE87344: Lamin-B1 contributes to the proper timing of epicardial cell migration and function during heart development

GSE90111: Functional genomics of HDAC class-I specific inhbitor 4SC-202 in pancreatic cell lines [RNA-seq]

GSE83312: ATAC-seq and RNA-seq of adult mouse rods and cones

GSE87542: RNA-Seq Analysis of Dose-Dependent TCDD-Elicited Duodenal Gene Expression in Male Mice

GSE101678: RNA-seq data of intestinal epithelial cells and lamina propria dendritic cells

GSE90140: Molecular reprogramming of granulocyte/macrophage progenitor (GMP) clusters upon 5-Fluorouracil (5-FU) treatment

GSE87554: Genome-wide transcriptional profiling of YAP target genes in human endothelial cells

GSE95027: ZNF131 suppresses centrosome fragmentation in Glioblastoma stem-like cells through regulation of HAUS5

GSE101748: Loss of Apela peptide in mice causes low penetrance embryonic lethality and defects in early mesodermal derivatives

GSE129827: Gene expression comparison of splenic virus-specific CD8 T cells after immunization with LCMV vector and treatment with IgG or aIFNAR1

GSE87212: Targeting Phospholipase D4 attenuates kidney fibrosis by modulating immune system and activating proteases

GSE87387: RNA-seq of primary murine lung adenocarcinoma cells from KP and JKP mice

GSE88757: Identification of miR-100 and miR-125b targets by AGO2 RIP-seq and RNA-seq after ectopic expression of miR-100 or miR-125b and evaluation of the TGFb expression signature in PANC-1 cells by RNA-seq

GSE93904: Gene expression profile of CRC-derived HILEC

GSE87240: S-adenosyl-methionine treatment selectively block liver cancer cell lines transformation and invasiveness by alterations of cancer- and invasion specific transcriptome and methylome (RNA-Seq)

GSE88840: Conversion of adult endothelial cells into immune-competent long-term repopulating authentic haematopoietic stem cells

GSE87720: Term placenta single cell transcriptome

GSE93293: Determination of Lsd1 function in inguinal white adipose tissue (ingWAT) by global transcriptome analysis

GSE87692: Single-cell transcriptomics of the human placenta: inferring the cell communication network of the maternal-fetal interface

GSE88741: Gene expression changes in human melanoma cell lines compared to primary melanocytes

GSE140014: RNA-seq data of Spermatogonia cells of Tet1-ko and WT

GSE93847: STAT5BN642H is a driver mutation for T-cell neoplasia (RNA-Seq)

GSE89476: Regionally distinct astrocyte interferon signaling promotes blood-brain barrier integrity and limits immunopathology during neurotropic viral infection

GSE85191: Widespread transcriptional pausing and elongation control at enhancers

GSE94641: Single cell RNA expression of mouse embryonic basal forebrain

GSE88998: Th2 responses are primed by skin dendritic cells with distinct transcriptional profiles

GSE106170: RNA-seq analysis of umbilical cord blood cells upon knockdown of NAP1L3

GSE89062: Integrated Transcriptomic and Proteomic Dynamics of Rituximab Treatment in B Lymphoblastoid Cells

GSE89532: RNAseq analysis of thymic CD4-CD8- double-negative (DN) invariant NKT cells from CD4+CD8+ double-positive (DP)-specific Rag2-conditional knock-out mice