Explore curated data sets and assays

Pluto has a large database of published data, available to explore, conduct your own analysis, and view QC reports.

Sequencing-based assays (Page 120)

Store large, raw sequencing data files and transform them into biologically-meaningful results in your browser. Gain critical QC information, quantify targets within and across data sets, and run best-in-class computational biology analyses specific to each assay type.

Explore curated data sets and assays

Sequencing-based assays (Page 120)

GSE153337: STAT1 Dissociates Adipose Tissue Inflammation from Insulin Sensitivity in Obesity

GSE155198: Multi-omic data integration allows baseline immune signatures to predict hepatitis B vaccine response in a small cohort

GSE157661: Transcriptional profiling of hepatocyte, reprogrammed hepatocyte, and biliary cells [human]

GSE99181: Selectively targeting bromodomain and extraterminal proteins for degradation as a novel anti-glioblastoma strategy [RNA-seq (time course)

GSE52285: A Werner syndrome stem cell model unveils heterochromatin alterations as a driver of human aging

GSE152487: Mechanics of a multilayer epithelium instruct tumor architecture and function [adult]

GSE155777: IRF3 prevents colorectal tumorigenesis via inhibiting the nuclear translocation of -catenin

GSE155237: RNAseq of nasal cells from pre-symptomatic volunteers experimentally infected with RSV

GSE157646: RNA sequencing analysis of SLC6A15 overexpression in papillary thyroid cancer cells

GSE148440: Molecular and cellular consequences of genetic knockout of Hdac2 and Hdac3 in striatal medium spiny neurons of Huntington's disease knock-in mice

GSE152486: Mechanics of a multilayer epithelium instruct tumor architecture and function [E15]

GSE157652: Transcriptomic and functional deficits in human TREM2-/- microglia impair response to Alzheimers pathology in vivo

GSE149662: Muscle Specific Insulin Receptor Overexpression Protects Mice from Diet-Induced Glucose Intolerance but Leads to Post-Receptor Insulin Resistance

GSE155176: Whole Tissue Transcriptome of HS Lesional, HS Nonlesional, and Healthy Skin

GSE150634: RNA sequencing analysis of anti-CD3/CD28 stimulated wild type-OT1 (WT) and Lrch1-/- -OT1 (KO) CD8+ T cells

GSE155064: Gene expression profiling of Control and Low BCAA fed aged mouse muscle

GSE151006: Wild-type and tafazzin-deficient clones of granulocyte-monocyte progenitors (GMP), ER-HOXB8 conditionally immortalized, immature, in estrogen.

GSE156875: Thymic stromal lymphopoietin limits primary and recall CD8+ T cell anti-viral responses

GSE156612: Stem cell-derived neutrophil-primed progenitors prevent lethal infection

GSE157466: Quantitative transcriptome analysis of human embryonic stem cells, human mesenchymal stem cells and human musculoskeletal stem cells

GSE152573: RUNX1 and CBF-SMMHC transactivate target genes together in abnormal myeloid progenitors for leukemogenesis

GSE155079: Enhancer priming by H3K4 methylation safeguards germline competence [RNA-seq]

GSE155203: RNA expression in NSUN6 knockout cells

GSE157369: Global gene expression profiles of GATA6-AS1 knockdown cultures and control shRNA cultures at cardiomyocyte differentiation day 2 and day 5

GSE43440: Coordinated regulation of synthesis and stability of RNA during the acute TNF-induced proinflammatory response

GSE151565: Transcriptomic profiling of circadian genes in WT mouse tissues (mRNA-Seq)

GSE152617: Fibrosis and atrial fibrillation in Scn1b null mice

GSE157380: Derivation of endometrial gland organoids from term placenta

GSE157518 (mouse): VISTA re-programs macrophage biology through the combined regulation of tolerance and anti-inflammatory pathways

GSE150420: Transcriptomic differences between mouse tumor-infiltrating and splenic regulatory T cells with or without Treg-specific loss of CD177

GSE151840: RNA sequence for macrodactyly ADSCs

GSE155289: Gata3 controls stem/progenitor maintenance potential in prostate organoids

GSE155030: Sphingosine kinase 2 regulates CD4+ T cell responses following LCMV Cl 13 infection

GSE157382: Subunit vaccine elicited lung TRM cells use fibroblast IL-17R signaling to provide serotype independent immunity against hypervirulent K. pneumoniae

GSE157351: AK-098_pmel-BO112

GSE157624: Next generation sequencing of CD11b+ cells from female and male Wildtype and Cystatin C knockout mice with experimental allergic encephalomyelitis (EAE)

GSE149716: Loss of cyclin A2 in murine colonic epithelial cells disrupts colon homeostasis by triggering DNA damage and dysplasia and high cyclin A2 expression is a good-prognosis factor in patients with colorectal cancer

GSE149744: Widespread IFN-independent activities of mammalian STING in viral infection and tumor immune evasion

GSE150784: Synergism between IL7R and CXCR4 drives BCR-ABL induced transformation in Philadelphia chromosome-positive acute lymphoblastic leukemia

GSE157390: EHMT1 gene truncation in HEK293 cells recapitulates Kleefstra Syndrome disease phenotype

GSE151562: Next Generation Sequencing Facilitates Quantitative Analysis of Runx2fl/fl and Gli1-CreERT2;Runx2fl/fl Mouse Molar Transcriptomes

GSE116929: Recapitulating the Human Segmentation Clock with Pluripotent Stem Cells - RNAseq analysis of in vitro induced human presomitic mesoderm (PSM) and identification of components of the human segmentation clock [Oscillation_Hs]

GSE142226 (human): Embryonic erythropoiesis and hemoglobin switching require transcriptional repressor ETO2 to modulate chromatin accessibility and looping (RNA-Seq)

GSE149647: The effect of active YAP in neonatal heart of Xin knockout mice

GSE155252: Mouse transcriptome of two genetic mutations of Grm1

GSE156262: CMV-specific cytotoxic T lymphocytes (CTLs) RNA-seq at the early phase of allo-HCT

GSE157409: ERG-mediated coregulator complex formation maintains androgen receptor signaling in prostate cancer [Bulk RNA-seq]

GSE39821: RNA-Seq of cKIT+ sorted cells from 16-16.5 week old fetal testes and ovaries and RNA-Seq of TRA-1-60+ H1 hESCs

GSE151460: bacTRAP profiling of seven different types of neurons , vulnerable and resistant to Alzheimer's disease (AD) across the lifetime of the mouse

GSE148647: Transcriptome mapping of alveolar macrophages developing under Scgb1a1 deficiency.

GSE156282: RNA-seq of WT liver with DEX, Zn and untreated controls

GSE157439: RNA sequencing of wild type and FXR KO CD8+T cells in fed/fasted LCMV-infected mice

GSE151421: Sirt2 Inhibition Reprograms T Cell Metabolism to Confer Superior Anti-Tumor Immunity

GSE155131: Reversal of synaptic and behavioral deficits in a 16p11.2 duplication mouse model via restoration of the GABA synapse regulator Npas4

GSE152595: Coordinated regulation of cellular identity-associated H3K4me3 breadth by the COMPASS family

GSE150801: Varenicline reduces ethanol consumption in male C57BL/6J mice: Potential gene expression mechanisms

GSE151630: Combinatorial single-cell analyses of granulocyte-monocyte progenitor heterogeneity reveals an early uni-potent neutrophil progenitor

GSE150755: RNA sequencing of late juvenile whole mouse wildtype and Adad2 mutant testis

GSE155550: The SNARE Regulator Complexin3 is a Target of the Cone Circadian Clock in the Mouse Retina

GSE153549: Transcriptomic Analysis Links the Response of Diverse Hypothalamic Cell Types to Sustained Diabetes Remission Induced by Fibroblast Growth Factor 1 [bulk RNA-seq]

GSE152611: Neural Stem Cells Direct Axon Guidance via their Radial Fiber Scaffold

GSE155885: Molecular features of the measles virus viral fusion complex that favor infection and spread in the brain [mouse]

GSE155310: Analysis of transcription profile for High Grade Serous Ovarian Cancer (HGSC) cell line panel and how it relates to chromosomal instability (CIN)

GSE151834: Type V collagen in scar tissue regulates the size of scar after heart injury

GSE155356: Charaterization of monocytes/macrophages function in Club cell regeneration after naphthalene injury in WT mice

GSE148882: Multi-omics analysis of hematopoietic progenitors in the fetal liver of Mettl3 deficient mice

GSE148859: Hepatocyte-Specific TAK1 Deficiency Drives RIPK1 Kinase-dependent Inflammation to Promote Liver Fibrosis and Hepatocellular Carcinoma

GSE148977: An Integrated Epigenomic and Transcriptomic Map of Mouse and Human ab T Cell Development (Mouse scRNAseq)

GSE152715: Cell-type-specific transcriptomic perturbations in a mouse model of HNRNPU haploinsufficiency

GSE150983: HIF-1a and HIF-2a differently regulate tumour development, metabolism and inflammation of clear cell renal cell carcinoma in mice

GSE156692: Identification of cellular context sensitive regulatory variation in mouse genomes

GSE156979: Hyaluronan Control of the Primary Vascular Barrier during Early Mouse Pregnancy is Mediated by Uterine NK Cells

GSE151009: Dissecting the onset of random X-chromosome inactivation at high temporal and allelic resolution

GSE151133: Substrate reduction therapy using Genz-667161 reduces levels of pathogenic components in a mouse model of neuronopathic forms of Gaucher disease

GSE155359: Charaterization of function of ST2 receptor on macrophages function during Club cell regeneration after naphthalene injury in WT mice

GSE156776: Translocation of Viable Gut Microbiota to Mesenteric Adipose Drives Formation of Creeping Fat in Humans

GSE152666: CARM1 inhibition reduces histone acetyltransferase activity causing synthetic lethality in CREBBP/EP300 mutated lymphomas [RNA-seq_MEF]

GSE151234: Morphine leads to global genome changes of H3K27me3 levels in mESCs by a self-regulatory mechanism of Polycomb Repressive Complex 2 (PRC2)