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Sequencing-based assays (Page 75)

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Explore curated data sets and assays

Sequencing-based assays (Page 75)

GSE136072: RNA-expression profiling of mouse B cells coexpressing LMP1 with EBNA3A, Rel or Ebf1 in vitro

GSE122045: Molecular Characterization of auditory nerve with Versican deficiency

GSE121954: Transcriptomic analysis of mRNA expression changes induced by RANKL expression in the murine salivary gland

GSE119117: Longitudinal transcriptomic characterization of the immune response to acute hepatitis C virus infection

GSE110391: The protective effect of celastrol in ANIT-induced cholestasis

GSE121665: Transcriptome-wide off-target RNA editing induced by CRISPR-guided DNA base editors [BaseEditors - RNA]

GSE110327: TCR signal strength controls thymic differentiation of iNKT cell subsets

GSE113178: Role of lncRNA BC030870 in mammary gland cell proliferation

GSE124450: Integrative analysis identifies lincRNAs up- and downstream of neuroblastoma driver genes (ALK)

GSE119866: A novel lncRNA lncRNA-AF339830 promotes colorectal carcinogenesis and glucose metabolism by stabilizing and specifying the transcription modification pattern of c-Myc [RNA-Seq]

GSE139647: "TRADES": Targeted RNA demethylation by Suntag system

GSE121024: The role of Mediator and Little Elongation Complex in transcription termination

GSE129733: Total Stranded paired end RNA Seq of wildtype and knockout Kdm4a 2 cell embryos

GSE117726: The transcriptome analysis of Treg subset

GSE111025: RNA-seq of Tfh IL21+ single producers and Tfh IL21+ IL10+ double producers

GSE139332: Investigating the Interleukin-22 regulated transcriptome in normal and APC-mutant small intestinal epithelial organoids

GSE121660: Arnt2 tunes activity-dependent gene expression through NCoR2-mediated repression and Npas4-mediated activation

GSE120928: Global gene expression analysis in Naive vs. ASC KO murine CD4 T cells post-activation

GSE122874: Comparison of NK cell developmental stages in bone marrow of Tbx21 WT versus KO mice

GSE123680: Hsa-miR-139-5p/HNRNPF axis modulates gene-transcripts balance in thyroid cancer cells

GSE119313: Lack of NFATc1 SUMOylation protects from inflammatory diseases

GSE145203: Transcriptional responses to TNF following HFol treatment of wild type and GCN2 depleted synoviocytes

GSE120522: Single cell transcriptome profiling of mouse and hESC-derived pancreatic progenitors

GSE119709: Transcriptional responses to IFN-alpha in human dermal fibroblasts

GSE121653: Single-cell RNAseq Reveals Developmental Origins and Ontogenetic Stability of Neurexin Alternative Splicing Profiles

GSE121037: RNA-seq of spleen tissue of wild type and Elf4 deficient mice after Plasmodium yoelii 17XNL infection

GSE136001: Single cell RNA sequencing reveals functional heterogeneity and sex differences of glioma-associated brain macrophages

GSE120183: Profiling of RNAs downregulated by influenza A virus PA-X ribonuclease

GSE119861: Single cell gene expression analysis of stem cell-derived cerebral organoids treated with Methamphetamine

GSE136055: Physiological Histone H2B ADP-ribosylation Controls Adipogenesis

GSE125153: NF-kB regulator Bcl3 modulates bone density and turnover

GSE125483: Conservation, acquisition, and functional impact of sex-biased gene expression in mammalian tissues

GSE123281: Large 1p36 deletions affecting Arid1a locus facilitate Mycn-driven oncogenesis in a new neuroblastoma model

GSE110957: The Trithorax protein Ash1L promotes myoblast fusion by activating Cdon expression

GSE120595: Jarid2 Functions as a Tumor Suppressor in Myeloid Neoplasms by Repressing Self-Renewal in Hematopoietic Progenitor Cells

GSE110378: Kdm6b is Required for Self-Renewal of Normal and Leukemic Stem Cells Under Proliferative Stress

GSE120107: Mutant p63 disrupts the key specification switch from the multipotent cell state to stratified epithelia during epithelial differentiation/in ectodermal dysplasia disorders

GSE121705: Sex chromsomes affect gene expression of autoantigen specific CD4+ T cells.

GSE125873: RNA-Seq of blood in preterm infants with Bronchopulmonary dysplasia.

GSE129754: PRMT1-mediated FLT3 arginine methylation promotes FLT3-ITD+ Acute Myeloid Leukemia maintenance

GSE120858: MYCN knock-down leads to DNA-repair deficiency in human neuroblastoma (RNA-Seq)

GSE123309: Next Generation Sequencing (NGS) Facilitates Quantitative Analysis of Differentially Expressed Genes in Liver Regeneration After Combined Treatment With Ethanol And Carbon Tetrachloride

GSE121040: Transcriptome analysis of Brucella abortus S19per (a perosaminesynthetase gene mutant of strain S19) immunized mice spleen revealed activation of MHC-I and MHC-II pathways

GSE129482: RNAseq of NTCU-induced mouse lung squamous cell carcinoma

GSE120977: Transcriptomic analysis of liver mRNA from TSP-1 KO and WT mice fed with normal diet or choline deficient amino acid defined diet (CDAHFD, human NASH model)

GSE123957: RNA-binding chromatin modifier MTA1 regulates mitotic transition and tumorigenesis by orchestrating mitotic mRNA processing [Non-synchronized RNA-seq]

GSE111902: Compendium of CD8+ T cell Data

GSE123723: Polycomb dysfunctional transcriptional repression in muscle stem cells contributes to lamin dependent muscular dystrophy [RNA-seq]

GSE121573: Recruiting Endogenous ADARs with Antisense Oligonucleotides to Reprogram the Transcriptome

GSE120146: Transcriptomic signatures indicative of a non-genotoxic adverse outcome pathway for small intestine cancer in the duodenum of mice exposed to hexavalent chromium, captan, or folpet

GSE143143: Neutrophil extracellular trap induced dendritic cell activation leads to Th1 polarization in type 1 diabetes

GSE122984: Comparing the transcriptomes of islets in high fat induced obesity mice and normal mice

GSE116313: Changes in mitochondrial function and browning markers of subcutaneous and visceral white adipose tissue of C57BL/6j mice from weaning to young adulthood

GSE115033: CLEAR: Coverage-based Limiting-cell Experiment Analysis for RNA-seq (mouse)

GSE121753: Delineating functional enhancers (cis-regulome) in LPS-activated murine splenic B cells

GSE110397 (mouse): NK cell-mediated cytotoxicity contributes to tumor control by a cytostatic drug combination

GSE110795: RNA-seq expression profiling of cortical bone from ephrin B2 deficient and control mice

GSE123683: Transcriptome analysis upon C6orf203 silencing

GSE121044: RNA seq analysis of the mouse pNC and Cornea transcriptome

GSE111173: De novo DNA methylation at imprinted loci during reprogramming into nave and primed pluripotency

GSE117781: Cellular origin, tumour progression and pathogenic mechanisms of cutaneous neurofibromas revealed by mice with Nf1 knockout in boundary cap cells

GSE121697: Epidermal growth factor activates -catenin via integrin-linked kinase to control proliferation of mesenchymal stromal cells.

GSE123657: mRNASeq of z_Q175 knock-in mouse lines with and without neo cassette

GSE121790: Transcriptomic analysis of trophoblast interactions with receptive vs. non-receptive endometrial epithelium: an in vitro model for human implantation

GSE120330: Global Long Terminal Repeat activation participates in establishing the unique gene expression program of classical Hodgkin Lymphoma [RNA-Seq]

GSE108679: Immune Resistance Emerges from Tumor-Initiating Stem Cells

GSE120087: Cardiac ReductomiRs: Identification of Novel Nrf2-Dependent microRNAs as Post-Transcriptional Regulators of Myocardial Gene Expression [mRNA]

GSE111080: RNA-seq analysis of Slc39a8(neo/neo) versus wild-type mice: yolk sac, placenta and fetal liver, kidney, lung, heart and cerebellum

GSE110787: Novel Protective Role of Nicotinamide Phosphoribosyltransferase in Acetaminophen-induced Acute Liver Injury in Mice

GSE121768: Transcriptomics and chromatin accessibility analysis of MLL-AF9 early responses in mouse bone marrow cells

GSE123734: Functional dissection of MIEN1 trans-regulation provides new evidence for colorectal cancer genome editing-based therapeutics

GSE143847: Whole transcriptome RNAseq analysis of somatic cells in Inhba fetal testes

GSE120874: Transcriptome analysis of Bcl11b-deficient regulatory T cells at steady state

GSE122175: Differentially expressed genes in Oesophageal tumours in Grhl3 cKO mice in comparison with WT mice

GSE109171: RNA sequencing of sorted microglia from NEFH-tTa/tetO-hTDP43 transgenic mouse whole spinal cord

GSE136002: Transcriptome analysis of control and ERK3-depleted Human Colonic Primary Epithelial cells (HCPECs)

GSE123738: Nr4a transcription factors limit CAR-T cell function in solid tumors [RNA-Seq]

GSE121842: Next Generation Sequencing Analysis of Colorectal Cancer Tissue Transcriptomes