PLX144320
GSE136002: Transcriptome analysis of control and ERK3-depleted Human Colonic Primary Epithelial cells (HCPECs)
- Organsim human
- Type RNASEQ
- Target gene
- Project ARCHS4
RNA sequencing analysis of control and ERK3 knockdown HCPECs was performed to understand the physiological relevance of ERK3 in maintaining basal as well as LPS-mediated innate immune responses in HCPECs. Results revealed that ERK3 is required for the regulation of several key cytokines and chemokines even at the steady state.; In particular, we discovered that ERK3 is indespansable for the transcriptional regulation of CXCL8/IL-8, CXCL10, MCP-1/CCL2 and GCP-2/CXCL6. Concomitantly, a functional interpretation of the differentially expressed (DE) genes with topGO indicated an important role of ERK3 in regulation of genes involved in, among others, immune responses and leukocyte chemotaxis. SOURCE: Federico Marini (marinif@uni-mainz.de) - University Medical Center - Mainz
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