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Sequencing-based assays (Page 46)

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Explore curated data sets and assays

Sequencing-based assays (Page 46)

GSE85302: KAT6A determines CD8+ T cell diversity via regulation of co-receptors

GSE83340: RNA-seq analysis of neonatal mouse cochlear supporting cells [Treated AK]

GSE93807: Therapeutic utility of natural estrogen receptor beta agonists on ovarian cancer

GSE98157: Fatty Acid Oxidation and Glycolysis Regulate Skin ECM Homeostasis by Shifting Fibroblasts between Catabolism and Anabolism (RNA-Seq)

GSE99349: Gene Network Dysregulation in Dorsolateral Prefrontal Cortex Neurons of Humans with Cocaine Use Disorder

GSE94057: BET-Bromodomain Inhibitors Engage The Host Immune System And Regulate Expression Of The Immune Checkpoint Ligand PD-L1 [3mRNA-seq]

GSE83350: Genome-wide analysis of gene expression in infarcted and non-infarcted left ventricle from NEIL3-deficient mice subjected to myocardial infarction

GSE150687: Gene regulatory networks controlling differentiation, survival, and diversification of hypothalamic Lhx6-expressing GABAergic neurons

GSE87577: Transcriptional study of ARN8 cells treated with novel DHODH inhibitors

GSE92346: Expression charcaterization of an internal protocol developed to differentiate RPE cells

GSE83560: Gene expression profiling of papillary thyroid cancer from central and invasive regions

GSE84061: Age-related alterations in Wnt-signaling in paneth and stem cells isolated from intestinal crypts.

GSE118217: RNAseq analysis of Angiotensin II perfused Apolipoprotein E deficient mice reconstituted with Wild Type or Netrin-1 deficient hematopoietic stem cells

GSE77988: BET Bromodomain inhibition promotes neurogenesis while inhibiting gliogenesis in neural progenitor cells

GSE85324: Genome-wide maps of m6A circRNAs identify widespread and cell-type-specific methylation patterns that are distinct from mRNAs

GSE85039: A multi-scale model for hair follicle reveals heterogeneous skin domains drive rapid spatiotemporal hair growth patterning

GSE83964: Sox2 suppresses gastric tumorigenesis in mice [RNA-seq]

GSE87581: RNA-seq in endometrial stromal tumors

GSE81492: APOL1 variant expression in mouse podocytes cause kidney disease

GSE86895: Elevation of GPRC5A expression in colorectal cancer promotes tumor progression through VNN-1 induced oxidative stress

GSE102767: GATA2 is Dispensable for Generation of Hemogenic Endothelium But Required for Endothelial-to-Hematopoietic Transition

GSE152453: Transcriptomic profile of cord blood B cells and thymic B cell subsets in human neonates

GSE81489: In fetal testis, SOX9 acts on transcription and splicing of its targets genes through binding to genomic regions with conserved signatures [RNA-seq]

GSE76466: The helix-loop-helix protein ID2 governs NK cell fate by tuning their sensitivity to interleukin-15

GSE104105: Transcriptional profiling of MDA-MB-231 and its 0 cells (lacking mtDNA) after 48h arginine depletion by arginine deiminase (ADI).

GSE101675: Integrative Proteomic Profiling Reveals PRC2-Dependent Epigenetic Crosstalk Maintains Ground-State Pluripotency.

GSE87748: An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3 [RNA-Seq]

GSE86053: Human Osteosarcoma Transcriptome

GSE83584: Transcriptome profiling of self-renewing hESCs and multipotent mesoderm progenitor cells as a function of substrate stiffness

GSE84535: Next-generation sequencing and quantitative analysis of wild type and p110gamma -/- tumors and tumor-associated macrophages

GSE85019: CXXC1-mediated Epigenetic Maturation is Crucial for Development Competence of Mouse Oocyte

GSE83762: NFIA Controls the Brown Fat Gene Program by Co-Localizing with PPARgamma at Cell-Type-Specific Enhancers (RNA)

GSE85455: ADAR1 controls apoptosis of stressed cells by inhibiting Staufen-mediated mRNA decay

GSE95132: Coding and noncoding transcriptome sequencing of KRAS mutated colorectal tumors and adjacent tissues from cancer patients and KRAS mutated Aberrant Crypt Foci and matching normal crypts from healthy individuals [RNA-Seq]

GSE77456: PHF6 regulates B-cell identity in acute lymphoblastic leukemia [RNA-Seq]

GSE83415: CD4+ T Cells Gene Expression-Based Biomarkers in Juvenile Idiopathic Arthritis (JIA)

GSE95782: Differential gene expression of mouse liver samples after poly I:C treatment

GSE85976: Collecting Duct-Specific Inactivation of HNF-1 Leads to Fibrocystic Disease and Impaired Urinary Concentration

GSE120299: Human Pancreatic Islets Expressing HNF1A Variant Have Defective cell Transcriptional Regulatory Networks

GSE83992: An improved method for identifying biological circular RNAs

GSE112730: Deficient LRRC8A-dependent Volume-Regulated Anion Channel (VRAC) activity is associated with male infertility in mouse and humans

GSE83125: Major Facilitator Superfamily Domain Containing 7C (Mfsd7c) Mediates the Effects of Heme on Cell Metabolism, Motility and Transcription

GSE78270: Transcriptome profiling in knock-in mouse models of Huntington's disease (cerebellum_mRNA).

GSE149661: CD8+ T-cells infiltrate Alzheimers disease brains and regulate neuronal- and synapse-related gene expression in APP-PS1 transgenic mice

GSE85519: Expression profiling of cochlear ducts from P8 Gfi1cre/+ and Gfi1+/+ mice

GSE83592: JQ1 +/- Vemurafenib in BRAF mutant melanoma (A375)

GSE86901: Evolutionary re-wiring of p63 regulatory landscape has both epigenetic and transcriptomic implications and is the underlying cause for epidermal differences between mouse and human [RNA-seq]

GSE87565: High fat diet-induced changes of mouse hepatic transcription and enhancer activity can be reversed by subsequent weight loss

GSE84013: Reprogrammed neurons from adult dermal fibroblasts of patients with Huntington's disease

GSE92486: Dietary restriction protects from age-associated DNA methylation and induces epigenetic reprogramming of lipid metabolism

GSE82336: Perlman syndrome nuclease DIS3L2 controls cytoplasmic non-coding RNAs and provides surveillance pathway for maturing snRNAs

GSE81882: Identification of a distinct IL-10 producing subset of innate lymphoid type-2 effector cells with regulatory potential

GSE150560: Comparative transcriptome of cancer cells with enhanced brain tropism

GSE83601: Dysregulated immune system networks in war veterans with PTSD

GSE87181: RNAseq in Pax7-reprogrammed corticotropes AtT-20 cells

GSE77472: The mammalian LINC complex controls mechanosensing at a genome-wide level: RNA-Seq

GSE89010: Haploinsufficiency of Ehmt1 or Ehmt2 is associated with an unexpected increase in H3k9 methylation

GSE94543: Next Generation Sequencing analysis using splenic DCs freshly isolated from Wild Type and TBK1-DKO mice

GSE83988: HIF-1 activation is sufficient for the development of MDS

GSE97544: Striatal transcriptome analysis of Shank3-overexpressing mice

GSE115529: Mixed tailing by TUT3 and TUT5 shields mRNA from rapid deadenylation [RNA-Seq]

GSE84547: Loss of Uhrf1 in neural stem cells leads to activation of retroviral elements and delayed neurodegeneration [E16VZ]

GSE83631: Transcriptional profiling of mouse embryonic tissues with Firre deletion

GSE83795: SHARPIN regulates collagen architecture and ductal invasion in the developing mouse mammary gland

GSE115928: Characterization of molecular changes at meiotic initiation in mice

GSE151576: Histone H3 Lys27 trimethylation readout by a BAH domain of BAHCC1 directs gene silencing [RNAseq_jurkat_O3SH2_RS4SH2]

GSE137494: Cell-type specific dysregulation of RNA alternative splicing in short tandem repeat mouse knockin models of myotonic dystrophy

GSE99537: Modulation of Macrophage Subpopulation Response in Radiation-Treated Gliomas Circumvents Tumor Recurrence

GSE83999: Modulation of ESRP2 and MBNL2 in normal kidney and clear cell renal cell carcinoma cell lines for analysis of stability programs

GSE115732: Genome-wide transcriptome analysis of regulatory T cells induced by Sox12

GSE122496: PRC2 inactivation cooperates with JAK3 mutant signaling in the development of T-cell acute lymphoblastic leukemia

GSE129495: KLF4 binding is involved in the organization and regulation of 3D enhancer networks during acquisition and maintenance of pluripotency [RNA-seq]

GSE83990: Zone dependent distinctive gene expression profile of the normal human liver tissue

GSE83436: Transcriptome analysis of mouse IgG1 memory B cell subsets

GSE77067: RNA-sequencing of single whole cells and nuclei from mouse dentate granule cells

GSE83637: RNA-seq transcriptome analysis of epidermal CD8+CD103+CD49a+ and CD8+CD103+CD49- T cells from healthy human skin

GSE84055: Gene Expression Profiling Using Huntington Disease Cell Culture Model

GSE109823: Expression levels of genes of NKG2C+ NK cells after in vitro treatment