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Sequencing-based assays (Page 17)

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Explore curated data sets and assays

Sequencing-based assays (Page 17)

GSE85329: Olfactory sensory neuron-specific IGF1R knockout in mice results in increased smell perception, insulin resistance and adiposity

GSE102630: Dietary effect on mouse intestinal Bmi1 stem cells

GSE117551: Crebbp loss drives small cell lung cancer and increases sensitivity to HDAC inhibition[thyroid]

GSE101596: Transcriptome analysis of fasted mouse livers

GSE90958: ncRNA transcription-induced changes in nuclear architecture directs with high precision enhancer-promoter interaction

GSE104064: RNAseq data on HDAC Class IIa inhibitor (CHDI-00390576) dosed Q175 mice.

GSE106389: RNAseq anaysis of ventral striatum cholinergic cells of p11 cKO mice

GSE156777: Next Generation Sequencing Facilitates Quantitative Analysis of Control and rhCYGB treated liver transcriptomes [TAA]

GSE110018: PU.1 represses and activates gene expression in early T cells by redirection of transcription factor ensembles [RNA-Seq]

GSE102639: RNA seq_A375 gSMARCB1 + A549 etoposide, Aurora kinases inhibitors treated

GSE132969: Vitamin C dependent KDM6 demethylation specifies a functional chromatin state for endothelial-to-hematopoietic transition [RNA-Seq]

GSE95293: KDM4 inhibition targets breast cancer stem cells [RNA-Seq]

GSE92323: Requirements for different Tcf1 isoforms in T cell development

GSE101510: IRF4 modulates CD8 T cell sensitivity to IL-2 family cytokines

GSE85360: The histone 3 lysine 4 methyltransferase Setd1b is a maternal effect gene required for the oogenic gene expression program

GSE92293: RNA-seq in neutrophils from Juvenile Idiopathic Arthritis

GSE89482: Gene Expression in Cx3cr1-GFP+ Cells in PS2APP Alzheimer's Disease mice

GSE101904: A quantitative chemotherapy genetic interaction map identifies new factors associated with PARP inhibitor resistance

GSE93313: Expression Analysis of 2D, 3D Quiescent, and 3D Activated Pancreatic Stellate Cells

GSE106390: Next Generation Sequencing Analysis of B16F10.9 melanoma cells untreated or treated with IFN-gamma

GSE94315: Higher levels of heteroplasmy at OriL control mtDNA copy number, glucose metabolism and lifespan in mice

GSE86021 (mouse): Crenolanib in combination with azacitidine abrogates stromal protection and survival of leukemia-initiating cells in FLT3-ITD+ AML

GSE105068: Genetic models reveal cis and trans immune-regulatory activities for lincRNA-Cox2 in vivo (lungs)

GSE101016: Dynamic regulation of T Follicular Regulatory (Tfr) cell responses by IL-2 during influenza infection

GSE100941: Cerebellar granule cell replenishment postinjury by adaptive reprogramming of Nestin+ progenitors

GSE95626: MLL4 establishes super-enhancers and broad H3K4me3 for tumor-suppressive function

GSE102113: Acetylation of cytidine in messenger RNA

GSE93974: Kdm2b regulates somatic reprogramming through variant PRC1 complex dependent function [RNA-seq]

GSE124936: Genomic Resolution of DLX-orchestrated Transcriptional Circuits Driving Development of Forebrain GABAergic Neurons

GSE107149: DNA methylation state is associated with the formation of loops and links in hematopoietic stem cells [RNA-seq]

GSE94372: downregulation of DDX5 and DDX17

GSE101558: Genome expression analysis of Lung Progenitors matured in the presence of constitutively active or pharmacologically inhibited Glycogen Synthase Kinase 3

GSE94144: Selective inhibition of EZH2 by a small molecule inhibitor regulates microglia gene expression essential for inflammation

GSE106468: RNA-seq profiles of WT and Qk-KO corpus callosum and oligodendrocytes

GSE100269: LEC-induced gene expression changes in melanoma cells

GSE90655: Clonal conversion of B-lymphoid leukemia reveals cross-lineage transfer of malignant states.

GSE100316: RNA-seq analysis of mTOR{delta}APC and WT lung and spleen APC subsets

GSE102185: Effect of FGF13 depletion on the H460 cell line

GSE103307: Role of FGFR1 in neuronal devlopment

GSE90466: CHD7 controls cerebellar development via Reelin

GSE94353: Hepatocyte maturation

GSE103390: Transcriptomic analysis of brainstem samples from mutants with Hoxa5 postnatal inactivation versus controls at postnatal day 21

GSE86903 (mouse): Comparative principles of DNA methylation reprogramming during human and mouse in vitro primordial germ cell specification [Mouse and Human RNA-seq and BS-seq]

GSE117547: Crebbp loss drives small cell lung cancer and increases sensitivity to HDAC inhibition[SCLC]

GSE109922: Genetic and epigenetic evolution as a contributor to WT1-mutant leukemogenesis

GSE94142: Genome wide maps of H3K4me3, H3K27me3 and H3K27ac in Brachyury mutants and RNA-seq data of Brachyury mutants

GSE119631: Characterization of the dynamics of lamin A and lamin B LADs in HepG2 cells: impact of cyclosporin A

GSE109195: Comparing the Transcriptomes of Marf1-genetrap (GT) oocytes with those microinjected with mRNAs for wild type MARF1 (GTWT) or D272-mutated MARF1 (GTD272) by RNA-Seq Analysis

GSE96050: ZFP36 RNA binding proteins restrain T-cell activation kinetics and anti-viral immunity [RNA-seq]

GSE92965: Cardiac microvascular endothelail cells of EC-KLF2 and/or KLF4 knockout mice at day 6 post-tamoxifen

GSE85353 (mouse): DNA methylation repels binding of hypoxia-inducible transcription factors to maintain tumour immunotolerance [RNA]

GSE107199: Next Generation Sequencing for Quantitative Transcriptomic Profiling of TLR3, TLR7 and TLR8 Activation in Neurons

GSE103664: The Estrogen Receptor (ER) has stage- and cell type-specific roles in the mammary epithelium with distinct requirements for activation function-1 and -2

GSE102812: RNA-seq of FSHD and control immortalised myoblasts

GSE96961: Environmental enrichment prevents transcriptional disturbances induced by alpha-Synuclein overexpression

GSE112823: The gene expression profiles of antigen-primed wildtype and Ddit3-/- CD8 Pmel T cells

GSE84589: Cis-regulatory landscape of four cell types of the retina

GSE93359: Transcriptome analysis of p16/p21-dependent monocytic myeloid-derived suppressor cells accumulation.

GSE94768: Comparison of Wild type and Pofut1-deleted skeletal muscle in young and old mice

GSE101540: RNA-seq of cancer cell lines treated with T-025

GSE99353: Frontal cortex transcriptomic analysis of a TDP-43 Q331K knock-in mouse

GSE93031: Defects in dosage compensation impact global gene regulation in the mouse trophoblast

GSE93339: Transcriptome analysis of wild-type and Yap-deficient embryonic lungs by RNA-Seq

GSE93381: Gene expression profiling (RNA-seq with partial depletion of rRNA) of livers of hypophysectomized male mice treated with a single pulse of growth hormone (GH)

GSE94159: Gene expression changes after blockade of Frizzled7 in murine intestinal organoids

GSE99989: Epidermal Wnt signaling regulates transcriptome heterogeneity and proliferative fate in neighboring cells

GSE94659: Next Generation Sequencing Facilitates Quantitative Analysis of Ern1f/f and Ern1f/fLyz2-Cre macrophage Transcriptomes

GSE94843: RNA-sequencing of murine norovirus (MNV) infection and loxoribine (Lox) stimulation in RAW264.7 macrophages

GSE124233: The non-canonical RNA polyadenylation polymerase FAM46C is essential for fastening sperm head and flagellum in mice

GSE101991: Retinoic acid regulation of bone marrow-derived LCs

GSE94011: E3 SUMO ligase PIAS3 fine-tunes dorsoventral patterning and visual response of cones in the mouse retina but is not essential for photoreceptor cell fate specification

GSE95141: RNA sequencing of striatum tissue from naive Csnk1e knockout mice and wild-type mice

GSE92723: Transcriptome analysis for KDM6A mutated urothelial bladder carcinoma and EZH2 inhibitor treated KDM6A mutated urothelial bladder carcinoma

GSE107419: Comprehensive mapping of transcriptional networks specifying lactogenic differentiation of murine mammary epithelial stem like cells

GSE102138: Transcriptional profiling identifies differential expression of long non-coding RNAs in Jo-1 associated and inclusion body myositis

GSE96650: Next Generation Sequencing of Wild Type and LXR-Ser196 phosphorylation deficient Murine Hepatic Transcriptomes on a Chow diet

GSE83471: Hierarchical RNA processing is rate limiting for mitochondrial ribosome assembly

GSE98947: Cell surface polysaccharides of Bifidobacterium induce functional regulatory T cells