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Sequencing-based assays (Page 10)

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Explore curated data sets and assays

Sequencing-based assays (Page 10)

GSE82180: Genome-wide identification of transcription factor ATOH1 target genes in adult small intestine and colon.

GSE103303: Fnip1 null kidney versus wildtype kidney RNAseq data

GSE81251: RNA-seq analysis of Kdm6a deficient brains in mice

GSE91390: Distinct Brca1 mutations differentially reduce hematopoietic stem cell function

GSE79790: Mapping Gene Expression in Excitatory Neurons During Hippocampal Late-Phase Long-term Potentiation

GSE86826: Mitochondrial DNA background significantly alters transcriptional response to a various diets in mice

GSE80988: mRNA expression data from human parthenogenetic haploid ESCs (hPGES), normal ESCs (H9) and human fibroblast

GSE76123: Role of MPL expression in determining heterogeneity of leukemia-initiating capacity of chronic myelogenous leukemia stem cells

GSE81125: Whole transcriptome analysis of functionally distinct cell types of the jejunal intestinal epithelium of germfree and conventionalized mice [mRNA]

GSE83264: Small RNA and mRNA transcriptome profiling in wildtype mice at multiple stages of spermatogenesis, from whole testis at day 1 postpartum (pp), day 3 pp, and day 7 pp and purified leptotene/zygotene and pachytene spermatocytes.

GSE119772: AP-induced hyperphagia is associated with a unique hypothalamic gene expression signature that is abrogated by adjuvant drug treatment

GSE77262: RNA-seq of mouse P19 half-life samples upon loss of UPF3A

GSE98510: RNAseq in mast cells

GSE83315: Memory of inflammation in regulatory T cells

GSE83266: The -catenin/CBP-antagonist ICG-001 inhibits pediatric glioma tumorigenicity in a Wnt-independent manner

GSE82177: Human liver RNA-seq data corresponding to uninfected non-malignant, HCV infected non-malignant, and HCV+ HCC tissue

GSE92572: Thyroid progenitors are robustly derived from embryonic stem cells through transient, developmental stage-specific overexpression of Nkx2-1

GSE94263: ATR Mutations Promote the Growth of Melenama Tumor by Modulating the Immune Microenvironment [skin]

GSE80993: Mitochondrial retrograde signaling in mammals is mediated by the transcriptional cofactor GPS2 via direct mitochondria-to-nucleus translocation [RNA-seq]

GSE84480: PCGF6-PRC1 suppresses premature differentiation of embryonic stem cells by silencing germ cell-related genes [RNA-Seq]

GSE101628: Effects of Inhibition of CDK8/19 Mediator Kinase by Senexin B in HCT116 cells treated with or without TNF-alpha

GSE81164: RNA Methyltransferase METTL14 Promotes Breast Cancer Growth and Progression

GSE105264: Uridilation by TUT4/7 restricts retrotransposition of human Line-1s

GSE86962: Profiling of CD34+ hair follicle stem cells

GSE91058: Egr1 deficiency induces browning of inguinal subcutaneous white adipose tissue in mice

GSE77357: PROP1 triggers epithelial-mesenchymal transition-like process in pituitary stem cells [RNA-Seq]

GSE81091: The global tissue-specific RNA transcription dysregulation effects in the third generation after embryonic exposure to the widely used herbicide atrazine are mediated via inherited histone trimethylation [RNA-Seq]

GSE113822: mRNA Seq of mouse tissues 9 weeks after RYGB or sham surgery [9 weeks]

GSE113764: Transcriptome of human white and brown adipose tissue biopsies

GSE82000: Transcriptional analysis of rescue of Tfr-mediated B cell suppression with IL-21

GSE85251: Postnatal DNA demethylation and its role in tissue maturation

GSE90827: Transcriptome profiling of Dmrta2 KO neural progenitor cells derived from mouse embryonic stem cells (mESCs)

GSE134488: Transcriptomic analysis of the soleus muscle extracted from Dnm2 K562E point-mutant heterozygous mice

GSE79586: Next generation sequencing facilitates quantitative analysis of changes in mRNA after knock-down of putative master regulators of the breast cancer metastasis transcriptome.

GSE120262: Transcriptome-wide mapping of host mRNA m6A modification to decipher the role of gut microbiome

GSE84526: RNAseq from Dp16 and control mice

GSE90047: A single-cell transcriptomic analysis reveals precise pathways and regulatory mechanisms underlying hepatoblast differentiation

GSE85272: Comparison of the transcription of palmitoylcarnitine induced pluripotent stem cells, normal induced pluripotent stem cells and embryonic stem cells through RNA-seq

GSE83314: Normal stroma suppresses cancer cell proliferation via mechanosensitive regulation of JMJD1a-mediated transcription [RNA-Seq]

GSE104490: Clonally expanded CD4+ T cells with a unique gene signature contribute to persistence of the HIV-1 latent reservoir

GSE82204: Genome-wide functional assessment of enhancer activities in the human genome

GSE84820: Metabolic exhaustion of T cells in chronic infection is mediated by inhibitory receptor PD-1 and T cell receptor dependent transcription factor IRF4

GSE77691: miRNA regulatory networks in male and female mouse ESC-to-EpiSC differentiation [mRNA]

GSE90874: Gene expression and 4sUDRB-seq for NF90/NF110 of human scramble and KD HeLa cells.

GSE82282: MDM2 facilitates adipocyte differentiation through CRTC-mediated activation of STAT3

GSE113799: RNA-seq of PC3 prostate cancer cell line xenografts in mice administered the ghrelin receptor antagonist [D-Lys3]-GHRP-6 or PBS for two weeks

GSE84534: A multi-functional AAV-CRISPR-Cas9 and its host response

GSE93006: Exhaustion-associated regulatory regions in CD8+ tumor-infiltrating T cells (OT-I vs P14 RNA-seq)

GSE84538: Expression patterns in chronic thromboembolic pulmonary hypertension

GSE81530: Development and differentiation of early innate lymphoid progenitors

GSE84531: RNAseq from disomic and trisomic T cells and monocytes

GSE126998: Expression data from A2780 cells treated with DMSO, Olaparib(Ola), Palbociclib(PD), and their combination (Ola/PD)

GSE108975: Von Hippel-Lindau protein is required for optimal alveolar macrophage terminal differentiation, self-renewal and function.

GSE83356: RNA-seq analysis of neonatal mouse cochlear supporting cells [NonTreated_JM]

GSE83100: Epigenomic remodeling of the PAX8 cistrome in high grade serous ovarian cancer [RNA-Seq]

GSE92308: Identification of imprinted gene Grb10 to associate with the pluripotency state in nuclear transfer embryonic stem cells using high throughput sequencing technology

GSE76748: The Histone Methyltransferases MLL1 and DOT1L Cooperate with Meningioma-1 to Induce AML [Mouse Dot1l ko RNA-seq]

GSE83796: Analysis of gene expression profiles in wild-type vs Ets1-/- follicular B cells

GSE129503: TBX5 Adult Knockout Atrial Gene Expression

GSE85331: Genome-wide transcriptomic analysis of cardiomyocyte differentiation from human embryonic stem cells and iPS cells (RNA-seq)

GSE87038: Single-Cell RNA-seq of Mouse Organogenesis

GSE85340: PNET animal model: new insights (II)

GSE121022: Gene Expression analysis in prostate cancer cell lines

GSE76482: Pancreas lineage allocation and specifciation are regulated by sphingosine-1-phosphate signalling

GSE84558: Discovery of Novel Determinants of Endothelial Lineage: Insights from Chimeric Heterokaryons

GSE90869: Transcriptome-wide landscape of subcellular mRNA redistribution in cell stress

GSE83132: Genes that mediate leptomeningeal metastasis from breast and lung solid tumor primaries

GSE77107: Single-cell RNA-seq of Ecad positive PyMT bulk tumor cells

GSE82073: Next Generation Sequencing of long-term hematopoietic cells (LT-HSCs) with or without mutations in JAK2 and Ezh2

GSE83084: alphaT-catenin in restricted brain cell types and its potential connection to autism

GSE103362: 4sU-seq analysis for tethering hnRNPK to Xist lacking of XR-PID

GSE82068: Negative allosteric modulation of mGluR5 partially corrects pathophysiology in a mouse model of Rett Syndrome

GSE92522: Transcriptional architecture of synaptic communication delineates cortical GABAergic neuron identity

GSE78274: Transcriptome profiling in knock-in mouse models of Huntington's disease (striatum_mRNA).

GSE83474: Biotin tagging of MeCP2 reveals contextual insights into the Rett syndrome transcriptome

GSE83808: T cells from paroxysmal nocturnal hemoglobinuria patients show an altered TNFR signaling pathway

GSE83476: Transcriptomic profiling of human coronary artery endothelial cells under laminar shear stress (LS), oscillatory shear stress (OS) and static culture (ST)

GSE76504: Transcriptome of IL-13 treated small intestinal tissue in Nod2-/- mice