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Sequencing-based assays (Page 98)

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Explore curated data sets and assays

Sequencing-based assays (Page 98)

GSE129858: Transcriptomic profiling of 4T1 cells depleted for Id1/3 and Robo1

GSE138746: Multi-omics and Machine Learning Accurately Predicts Clinical Response to Adalimumab and Etanercept Therapy in Patients with Rheumatoid Arthritis [RNA-Seq]

GSE129306: Apical sodium-dependent bile acid transporter inhibition with volixibat improves metabolic aspects and components of non-alcoholic steatohepatitis in Ldlr-/-.Leiden mice

GSE146063: Impact of human miR-887-3p on gene expression in human pulmonary microvascular endothelial cells

GSE129389: Tropifexor-Mediated Abrogation of Steatohepatitis and Fibrosis Is Associated With Antioxidative Gene Expression Profile in Rodents

GSE140015: Mechanism of Mitochondrial Dysfunction in Spinal and Bulbar Muscular Atrophy [RNA-seq]

GSE133179: Gene expression changes in ovaries of oocyte-specific conditional knockout of Ubc9 in juvenile mice

GSE137323: Developmental Cytoplasmic-to-Nuclear Translocation of RNA-Binding Protein HuR Is Required for Adult Neurogenesis

GSE138769: RNA sequencing of whole Dorsal Root Ganglia (DRG) upon Environmental Enrichment and Sciatic Nerve Axotomy (EE_SNA) or Sciatic Nerve Axotomy alone (SH_SNA) compared to Standard Housing Sham (SH_Sham)

GSE139059: TBL1XR1 mutations bias germinal center B-cells towards a pro-tumorigenic memory fate

GSE139090: Age-associated Changes in the Transcriptome of SCA7 Mice

GSE129691: Setd2 deficiency impaired erythroid differentiation and accelerated Myelodysplastic Syndrome(MDS) - associated leukemogenesis through S100A8 and S100A9

GSE137389: Loss-of-function of the long non-coding RNA A830019P07Rik in mice does not affect insulin expression and secretion

GSE141159: Transcriptome profiling of purified mouse platelets from Nxf1 mutant and control mice [Platelet]

GSE140063: RNA-sequencing of control and wy-14643 treated livers in wt and sirt6-hz mice

GSE132254: RNA Seq analyzed the transcriptional difference between the ICSI and ICAHCI embryo in blastocyst and placenta

GSE137347 (human): The transcriptomic landscape of MAIT cell development in the thymus (NN41 RNAseq data set)

GSE137430: A Phase 2 Randomized, Double-blind Pilot Study of IL-17-Targeting with 2 Secukinumab in Moderate-to-Severe Atopic Dermatitis

GSE146053: A negative reciprocal regulatory axis between cyclin D1 and HNF4 modulates cell cycle progression and metabolism in the liver

GSE142996: DNA polymerase interacts with H3-H4 and facilitates the transfer to parental histones to lagging strand

GSE139065: Sphingosine 1-phosphate-regulated transcriptomes in heterogenous arterial and lymphatic endothelium of the aorta

GSE134871: Epigenetic and transcriptional changes in aging mouse rod photoreceptors [RNA-seq]

GSE137463: Loss of the FOXP1 transcription factor leads to deregulation of B lymphocyte development and function at multiple stages

GSE140090: Transcriptomic analyses during oocyte growth

GSE152179: Characterization of a Novel Compound that Stimulates STING-Mediated Innate Immune Activity in an Allele-Specific Manner

GSE137793: Sex chromosomes affect gene expression of autoantigen specific CD4+ T cells in B6 gonadal males.

GSE131996: Neuropeptide CGRP limits ILC2 responses and constrains type 2 inflammation

GSE139115: An ExtendedCulture System that Supports Human Primordial Germ Cell-Like Cells Survival and Initiation of DNA Methylation Erasure

GSE137506: Genome-wide expression analysis in murine brain in E14.5 vs. 10.5m old mice

GSE137856: Transcriptional Profiling of Werner Syndrome (WS) iPSC-derived MSC and the isogenic gene-edited controls

GSE140570: Tandem CTCF sites function as insulators to balance spatial chromatin contacts and topological enhancer-promoter selection [VI]

GSE137555: Histone demethylase JMJD3 is a key epigenetic activator of FGF21 signaling-induced hepatic autophagy and lipid degradation

GSE137349 (mouse): The transcriptomic landscape of MAIT cell development in the thymus (C006 RNAseq data set)

GSE139914: The genomic underpinnings of oscillatory biomarkers supporting successful memory encoding in humans

GSE137914: Genome-wide mapping of gene expression in control and Tet2/Tet3-deficient B cell subsets

GSE152058 (mouse): Cell Type-Specific Transcriptomics Reveals that Mutant Huntingtin Leads to Mitochondrial RNA Release and Neuronal Innate Immune Activation

GSE77308: Loss of CSL unlocks a hypoxic response and enhanced tumor growth potential in breast cancer cells

GSE132261: mTORC1 to AMPK Switching Underlies -Cell Metabolic Plasticity During Maturation and Diabetes

GSE132313: The transcription factor Fosl2 controls systemic autoimmunity by repressing FoxP3 during T cell development

GSE139933: The transcriptomic differences between Th1, Tr1, Treg, and Tneg cells in Leishmania donovani-infected mice

GSE137420: Synapse alterations precede neuronal damage and storage pathology in a human cerebral organoid model of CLN3-Juvenile Neuronal Ceroid Lipofuscinosis

GSE134606: Polysome profiling quantified by RNA sequencing in ER knockdown and control BM67 cells

GSE137344: Ileum Transcriptomic Profiling in Inflammatory Bowel Disease

GSE132800: Liver macrophages inhibit the endogenous antioxidant response in obesity-associated insulin resistance [RNA-Seq]

GSE142121: Interaction of Va and Vc in somatic cell reprogramming

GSE137406: T cell receptor signal strength and antigen affinity differentially regulate memory CD8+ T cell development

GSE137878 (mouse): Regulation of RNA localization by FMR1

GSE133413: COMPASS Family Histone Methyltransferase ASH2L Mediates Corticogenesis via Transcriptional Regulation of Wnt Signaling [RNA-Seq 2]

GSE138729 (mouse): Induction of extracellular adenosine salvage and metabolic quiescence regulate the transitional to follicular B cell checkpoint in humans.

GSE137440: Splicing and gene expression changes in human mammary epithelial MCF-10A cells expressing SR or SR-like proteins

GSE130765: Next Generation Sequencing Analysis of Beta-actin knockout (KO) and wildtype (WT) Mouse Embryonic Fibroblast (MEFs) Transcriptomes Under Adipogenic Induced Conditions

GSE129731: SMARTSeq_v4 paired end mRNA Seq of Kdm4a control mutant oocytes and preimplantation embryos

GSE143212: Analysis of gene expression modulated by autophagy during bleomycin induced lung injury from mouse lung alveolar progenitor cells

GSE146147: A splicing regulatory axis of SRSF2-NUMB-NOTCH governs the generation of hemogenic endothelial progenitors derived from human pluripotent stem cells

GSE137510: RNA-seq analysis of IL-17A+/IFNy+ CD8+ and IL-17A+CD4+ T cells from Psoriatic Arthritis Synovial Fluid

GSE137411: Bimodal Adenine and Cytosine CRISPR Base Editing on DNA

GSE137920: RNA sequencing for human induced pluripotent stem cell cardiomyocyte differentiation

GSE137603: The splicing factor hnRNP M is a critical regulator for innate immune gene expression in macrophages

GSE142686: Early precursor T cells establish and propagate T cell exhaustion in chronic infection [RNA-seq]

GSE137551: Transcriptomic profiles of nonpregnant and term pregnant human myometrial tissues

GSE138784: RNA-seq on cells with or without pathogenic PAX1 variants at different stages of in vitro differentiation into thymic epithelial progenitor cells

GSE144136: Single-nucleus RNA-seq in the post-mortem brain in major depressive disorder

GSE139389: Embryonic Endothelial Evolution towards First Hematopoietic Stem Cells Revealed by Single-Cell Transcriptomic and Functional Analyses

GSE135902: The Transcriptome Of Cmml Monocytes Is Highly Inflammatory And Reflects Leukemia-Specific And Age-Related Alterations

GSE130302: The intestine harbours functionally distinct tissue-resident and inflammatory Th17 cells

GSE142748: Transcriptional responses of colon tissues following ex-vivo colonization with human microbiome

GSE139441: mRNA analysis in depolarized neuroblastoma cells

GSE137458: Sirena1: The most abundant lncRNA in mouse oocytes brings together post-transcriptional regulations and mitochondrial distribution (mouse dev_stages)

GSE129927: Single cell RNA sequencing of myeloid cell subsets in brain trauma links targeting Ccr2-dependent macrophages with both improved functional outcomes and a reduction in type I IFN responses from TBI microglia subsets

GSE138807: Comparative RNAseq of Mouse Parp3+/+ and Parp3-/- Neural Stem Progenitor Cells (NPSC)

GSE140914: Transcriptomic profiling of mesenchymal stem cells (MSC) differentiation into mesangial cells

GSE151284: Glioma escape signature and clonal development under immune pressure [RNA-Seq]

GSE140850: Tet3 ablation in adult brain neurons increases anxiety-like behavior and regulates cognitive function in mice

GSE139120: Lewis Lung Carcinoma UROD

GSE149014: Resident peritoneal macrophage exhibit marked sexual dimorphism in gene expression

GSE142754: Co-option of neutrophil fates by tissue environments

GSE129188: Coagulopathy signature precedes and predicts severity of end-organ heat stroke pathology in a mouse model

GSE138822: The Chromatin Remodeling Enzyme Chd4 Regulates Genome Architecture in the Brain