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Sequencing-based assays (Page 89)

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Explore curated data sets and assays

Sequencing-based assays (Page 89)

GSE132732: Human interleukin-4 treated regulatory macrophages promote epithelial wound healing and reduce colitis in an mouse model

GSE122865: Single-Dose CRISPR/Cas9 Therapy Extends Lifespan of Mice with Hutchinson-Gilford Progeria Syndrome

GSE139293: Next Generation RNA Sequencing Analysis of AMPK Wild Type, AMPK-KO and AMPK1-2A U2OS cell Transcriptomes

GSE132333: Gene expression profile of HGC27 gastric cancer cell p53 KO and KD

GSE132321: Cell-autonomous transcriptional mechanism for enhancement of translation capacity in secretory cells [RNA-Seq AtT-20 cells]

GSE132753: PRC1 catalytic activity is central to Polycomb system function. [RNA]

GSE140520: Amino acid levels determine metabolism and cyp450 function of stem cell derived hepatocytes and hepatoma cell lines

GSE132889: RNAseq of circulating CD34+ cells derived from TCIRG1-defective patients

GSE133465: Transcriptional effects of YAP/TAZ knockout in mouse gliomaspheres

GSE122384: Alcohol metabolism directly fuels histone acetylation in the brain [RNA-Seq II]

GSE131373: Spen links RNA-mediated endogenous retrovirus silencing and X chromosome inactivation [RNA-Seq]

GSE132965: The imbalance of excitatory/inhibitory neuron differentiation in neurodevelopmental disorders with an NR2F1 point mutation

GSE140461: Multifaceted rewiring of the hepatic lipidome during proliferation and carcinogenesis - PART 1 (Liver Regeneration)

GSE134888: Transcriptome wide analysis of translation efficiency in MCF7 cells using polysome profiling with and without eIF4A inhibition by hippuristanol treatment

GSE123893: Differential Metabolic and Multi-tissue Transcriptomic Responses to Fructose Consumption among Genetically Diverse Mice [Hypothalamus]

GSE122412: Engulfment gene ELMO1 in neutrophils as a promoter of inflammatory arthritis

GSE132997: Identification of Rfx6-dependent genes in the adult mouse ileon by RNAseq

GSE124364: miR205 Regulates Mammary Gland Development and Stem Cell Self-renewal through YAP and Wnt signaling

GSE132707: mRNA-Seq of BC-3 IRF4 KO, BATF KO, and vIRF3 KD

GSE132294: Transcriptome of FliC-stimulated mouse bladder and dependency on TLR5

GSE133245: Next Generation Sequencing of Wild Type and Gata2-/- LSCs

GSE132996: Gene Expression Following Transaortic Constriction in Cardiomyocyte Specific Insulin Receptor Substrate Knockout Mice

GSE133360: CSF-1 and IL-34 drive distinct microglial programs in the brain tissue

GSE133478: Influenza Vaccination Primes Human Myeloid Cell Cytokine Secretion and Natural Killer Cell Function

GSE132811: Recapitulating the Human Segmentation Clock with Pluripotent Stem Cells - RNAseq analysis of in vitro induced human presomitic mesoderm (PSM) and identification of components of the human segmentation clock [Oscillation_Mm]

GSE122589: Transcription factor activity and nucleosome organisation in mitosis

GSE132741: Muscle and blood RNA-seq in mdx and wt mice

GSE130882: Evaluation of ultra-low input RNA sequencing for the study of human T cell transcriptome

GSE122163: CEBPA Dysfunction Intiates CSF3R Mutant Acute Myeloid Leukemia Through Disruption of Myeloid Lineage Enhancers (RNA-seq - orders)

GSE141085: CHD8 and ELK1 cooperativity regulate cellular sensitivity to MAPK/ERK pathway

GSE143301: Ribosome profiling under ABCE1 depletion to study aberrant translation termination

GSE132055: Targeting the mevalonate pathway to overcome acquired anti-HER2 treatment resistance in breast cancer [RNA-seq]

GSE122566: Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and 2.5ppm iAs Treated Mouse Gastrocnemius Muscle Transcriptomes

GSE133481: Target identification of hepatic fibrosis therapy using Pien Tze Huang based on mRNA and lncRNA

GSE133483: TMX2 is a key regulator of cellular redox state and its dysfunction causes severe brain developmental abnormalities

GSE136165: Efficient Identification of Multiple Pathways: RNA-Seq Analysis of Livers from 56Fe Ion Irradiated Mice

GSE139341: RNASeq of Healthy Human Skin Tregs and CD4 Teffs versus Psoriatic Human Skin Tregs and CD4 Teffs

GSE132343: Suppression of FOXM1 Activities and Breast Cancer Growth in Vitro and in Vivo by a New Class of Compounds

GSE132074: Changes in total RNA in BK deficient mice after 4h sleep deprivation [individuals]

GSE133343: Analysis of gene expression in MEL cell before and after erythroid-like differentiation.

GSE133534: RNA sequencing for human induced pluripotent derived cerebral organoids

GSE132355: Single cell RNA-Seq identifies mechanisms controlling hypothalamic patterning and differentiation

GSE132081: Analysis of Roquin targetome during HCMV infection

GSE132773: RNA sequencing comparing normal and premalignant EuMyc B220+ cells in Max WT and conditional Max KO mice

GSE133486: Single cell sequencing of stromal vascular fraction (SVF) under B3-adrenergic agonist stimulation and mature adipocytes under cold exposure and B3-adrenergic agonist stimulation

GSE131015: Zfp281 orchestrates interconversion of pluripotent states by engaging Ehmt1 and Zic2 (RNA-seq)

GSE122225: UVB drives different stages of epigenome alterations during progression of skin cancer [RNA-Seq]

GSE132642: Droplet-based single-cell RNA-sequencing of mouse and naked mole-rat spleen and circulating immune cells, in natural conditions, following lipopolysaccharide (LPS) challanege, and saline control

GSE133489: Regionally specified human pluripotent stem cell-derived astrocytes

GSE134870: RNA-Seq of human adipose tissue (siNT vs siRND3 KD)

GSE104602: RNA-seq analysis of apoptotic HCT116 cells shows widespread mRNA decay and limited noncoding RNA decay.

GSE134623: TOPORS, a tumor suppressor protein, maintains higher-order chromatin organization in mouse hepatocytes [RNA-seq]

GSE133499: Glucocorticoid resistance in pediatric leukemia is associated with altered splicing profiles and vulnerability to spliceosome modulation

GSE125784: CRAC channel-mediated gene expression in Treg cells

GSE132121: Analysis of redundancy between RNAi and piRNA pathways in the mouse oocytes

GSE145495: RNAseq analysis on e9.5 mutant mouse hearts

GSE132695: Prevention of chromatin destabilization by FACT is crucial for malignant transformation [gene expression]

GSE138636: SRSF6-regulated alternative splicing of genes involved in DNA repair is associated with prostate cancer progression

GSE126151 (mouse): A systematic analysis of nuclear heat-shock protein 90 identifies a metazoan-specific regulatory module

GSE139292: Comparison of different shear stress conditions on gene proflile modulation in HCASMC and HCAEC, in the presence or absence of BVS+Everolimus

GSE143214: Single cell RNA sequencing of human naive CD4 T cells on young and old donors

GSE145464: Next Generation Sequencing Facilitates Quantitative Analysis of Transcriptome profile in IEC 4.1 cells in response to Cryptosporidium parvum

GSE128780: Mitofusin 2 is essential for oocyte and follicle development, and to maintain ovarian follicular reserve during reproductive aging [GV]

GSE132329: An epigenetic program established by gene environment interactions initiates pancreatic carcinogenesis [Set2]

GSE138676: The effect of modulating substratum biochemical properties on lung epithelial specification in vitro

GSE143147: Cyclin K interacts with -catenin to induce Cyclin D1 expression and facilitate tumorigenesis and radioresistance in lung cancer

GSE139358: Transcriptomic, epigenetic and functional analyses implicate neutrophil diversity in the pathogenesis of systemic lupus erythematosus [RNA-seq]

GSE132774: Dissecting the regulatory strategies of NFkB RelA target genes in the inflammatory response reveals differential transactivation logics [MEFs_3]

GSE133606: Gata2 rescue assay

GSE132075: Changes in total RNA in BK deficient mice after 4h sleep deprivation [pools]

GSE135315: RNA sequencing of uninfected, H37Rv- or Rv0222Ko-infected mouse peritoneal macrophages

GSE136752: PHF7 Modulates BRDT Stability and Histone-to-Protamine Exchange during Spermiogenesis

GSE134647: Targeting of IL-1 activity to CD8+ T cells mounts a strong antigen-specific cellular immune response and protects against influenza virus infection in mice

GSE145453: RNA-Seq of resting and activated Jurkat E6.1 cells

GSE133516: KAT7 maintains myeloid leukemogenesis recruits BRD4 to the promoters of target loci to maintain then MLL-AF9 transcriptional programme

GSE131019: Tousled-like kinase activity is required for transcriptional silencing and suppression of innate immune signaling [RNA-Seq]

GSE134900: The interplay between IL-15, gluten and HLA-DQ8 drives the development of coeliac disease in mice

GSE123875: Differential Metabolic and Multi-tissue Transcriptomic Responses to Fructose Consumption among Genetically Diverse Mice [Adipose]