Pluto Bioinformatics

GSE123951: RNA Seq to identify novel transcripts originating from orphan CGIs

Bulk RNA sequencing

To identify novel transcripts originating from orphan CGIs we isolated RNA from undifferentiated embryonic stem cells (ESCs), ESCs differentiated into embryoid bodies (EBs), and ESCs differentiated into neuronal cells; we also used RNA from mature male mouse brain. RNA Seq data were visually analysed for transcripts originating from orphan CGIs. SOURCE: Shaun,Michael,Webb (swebb1@staffmail.ed.ac.uk) - Bioinformatics Core Facility University of Edinburgh