Pluto Bioinformatics

GSE112226: Transcriptional profiling of intestinal changes following APC loss

Bulk RNA sequencing

Vil-CreERT2 was used to drive loss of APC (Adenomatous polyposis coli) in the murine intestinal epithelium. 4 days post induction, mice were sampled and 1cm of tissue from the proximal intestine was collected into RNA later. This was compared to control (wild-type) intestine. This analysis allows investigation of transcriptional changes following APC loss (and therefore activation of the WNT signalling pathway). SOURCE: Karen PickeringSansom Lab Beatson Institute

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