We have mapped transcript and protein concentrations in cervical cancer cells responding to treatment with tunicamycin over an eight hour time course. We complement this dataset with RNA footprints of ribosomes and non-ribosomal proteins to determine changes in translation and trans-factor binding. The goals of this study are to unveil the time dependent complexity of the signaling pathways at the level of transcription and  translation during different stress conditions like stress of the endoplasmic reticulum and oxidative stress. SOURCE: Shuvadeep Maity (sm6622@nyu.edu) - Vogel Lab New york University

Pluto Bioinformatics

GSE113171: Mapping multi-layered regulation in response to environmental stress