Pluto Bioinformatics

GSE135527: Tumors with TSC mutations are sensitive to CDK7 inhibition through NRF2 and glutathione depletion

Bulk RNA sequencing

We report the global gene expression effects in TSC-deficient and TSC wild type cells after treatemnet with. CDK7 inhibitor(THZ1), we performed RNA-Seq on TSC1-null HCV.29 cells and TSC1-intact HCV.29 cells treated with 30nM THZ1, and with 100nM THZ1, for 6 hours. Many genes showed marked changes in expression in comparison with control untreated cells. Furthermore, 1128 genes showed > 5-fold lower expression in 30nM THZ1-treated TSC1-null HCV.29 cells compared with 30nM THZ1-treated TSC1-intact HCV.29 cells. SOURCE: Mahsa Zarei (mzarei@bwh.harvard.edu) - BWH