Pluto Bioinformatics

GSE119026: m6A-RNA mapping, SND1-RNA binding profile mapping and SND1-depletion in KSHV-infected B-lymphocytes

Bulk RNA sequencing

We have mapped m6A sites and endogenous SND1 binding sites in the viral and cellular transcriptome using TREx BCBL1-Rta cells. In addition, we have depleted SND1 in TREx BCBL1-Rta cells and BCBL1 cells and analyzed their RNA expression profile both during latency and lytic replication. SOURCE: Agne Antanaviciute (umaan@leeds.ac.uk) - University of Leeds